Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H19
(757 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 0.77
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 25 1.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 3.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 3.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.1
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 22 7.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 22 7.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.4
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 9.4
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 25.0 bits (52), Expect = 0.77
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -1
Query: 145 SSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPI 17
S EP + + Y+ + + +K Y N I IE IP+
Sbjct: 76 SKEPKIISSLSNNYKYSNYNNYNNYNKKLYYKNYIINIEQIPV 118
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 24.6 bits (51), Expect = 1.0
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +3
Query: 9 AASIGIFSICLIILSYI 59
A ++G+FS+ I++SYI
Sbjct: 82 AGAVGVFSVLTILISYI 98
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 79 YKHQEKAMYDNIIRQIENIPI 17
Y + K +Y N I IE IP+
Sbjct: 109 YNNNYKKLYKNYIINIEQIPV 129
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 79 YKHQEKAMYDNIIRQIENIPI 17
Y + K +Y N I IE IP+
Sbjct: 109 YNNNYKKLYKNYIINIEQIPV 129
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 585 FRNSNKELCIKRESLKAHVMPTSG 656
FR+ +KELC + L + PT G
Sbjct: 485 FRDMHKELCDGKPGLCDAMKPTKG 508
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 9 AASIGIFSICLIILSYI 59
A ++G+FS I++SYI
Sbjct: 83 AGAVGVFSSPTILISYI 99
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -1
Query: 601 LFEFLKTNFRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDR 443
LF FL+T + P Y + E+L G+H + + Y+ TL+R
Sbjct: 25 LFSFLRTRTKLQPTYFHHTYIIYESL----CGRHEKRLLNELLSSYN--TLER 71
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -1
Query: 601 LFEFLKTNFRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDR 443
LF FL+T + P Y + E+L G+H + + Y+ TL+R
Sbjct: 25 LFSFLRTRTKLQPTYFHHTYIIYESL----CGRHEKRLLNELLSSYN--TLER 71
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 292 DDFIDCFGDEIKTGKVGTDI 233
DDF+ G I T KVG+ +
Sbjct: 18 DDFMKALGVGIMTRKVGSSV 37
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 756 WDGVSKCFRHIAL 718
WDGV CF + +L
Sbjct: 366 WDGVCMCFIYASL 378
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 756 WDGVSKCFRHIAL 718
WDGV CF + +L
Sbjct: 335 WDGVCMCFIYASL 347
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 756 WDGVSKCFRHIAL 718
WDGV CF + +L
Sbjct: 386 WDGVCMCFIYASL 398
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 756 WDGVSKCFRHIAL 718
WDGV CF + +L
Sbjct: 335 WDGVCMCFIYASL 347
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 413 CGLVFYNSVVTIQSK*RIVCFSI 481
CGL F + +++ Q I+C +I
Sbjct: 655 CGLRFEDPMISFQPGDTIICINI 677
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,788
Number of Sequences: 438
Number of extensions: 4378
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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