Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H17
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 85 9e-18
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 64 2e-11
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 53 5e-08
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 49 7e-07
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 31 0.28
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 29 0.64
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.84
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 29 1.1
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 29 1.1
SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyce... 27 2.6
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 2.6
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 2.6
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 27 3.4
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 27 3.4
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 3.4
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 4.5
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 5.9
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 7.8
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 26 7.8
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 26 7.8
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 7.8
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 85.4 bits (202), Expect = 9e-18
Identities = 45/120 (37%), Positives = 63/120 (52%)
Frame = -3
Query: 842 ETVEXPIEAQTHGLSVHELNGYVEQEGKMQAQDRQEKERADARNALEEYVYELRGKLSEG 663
+ + + Q L L Y E E +M A D+ E D +NALEEY+Y+ R KL +
Sbjct: 538 KVADLSVSVQEDRLPTEVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDD- 596
Query: 662 ETLHDFVAEDQRNKLVNHLDSVEQWLYDEGEDQNRQVYSDKLSELKTEGEPIKQRRLEFE 483
F E++ +K L E WLY+EGED + VY+ KL +L G PI+QR L+ E
Sbjct: 597 -IYAPFTNEEESSKFKEMLTKAEDWLYEEGEDTTKAVYTAKLEDLMRVGGPIRQRYLDAE 655
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/102 (29%), Positives = 56/102 (54%)
Frame = -3
Query: 803 LSVHELNGYVEQEGKMQAQDRQEKERADARNALEEYVYELRGKLSEGETLHDFVAEDQRN 624
LS ++ V++ + +D+ KER +ARN LE Y Y L+G+ + E L V + +
Sbjct: 538 LSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQ 597
Query: 623 KLVNHLDSVEQWLYDEGEDQNRQVYSDKLSELKTEGEPIKQR 498
+++ ++ V +WL GED +++ + D+ +L PI Q+
Sbjct: 598 AVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQK 639
Score = 27.5 bits (58), Expect = 2.6
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = -3
Query: 764 GKMQAQDRQEKERADARNALEEYVYELRGKLSEGETLHDFVAEDQRNKLVNHLDSVEQWL 585
GK+ +D+Q DA + E++ E+ G E + +F EDQR KL + + Q L
Sbjct: 589 GKVDPEDKQAV--LDAVEDVAEWL-EIHG---EDASKEEF--EDQRQKLDAVVHPITQKL 640
Query: 584 YDEG----EDQNRQVYSDKLSEL 528
Y EG ++++ + D+ EL
Sbjct: 641 YSEGAGDADEEDDDYFDDEADEL 663
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 53.2 bits (122), Expect = 5e-08
Identities = 36/128 (28%), Positives = 55/128 (42%)
Frame = -3
Query: 854 EGSCETVEXPIEAQTHGLSVHELNGYVEQEGKMQAQDRQEKERADARNALEEYVYELRGK 675
+G+ +T + I LS E++ V + K +A+D E R A+N LE Y Y LR
Sbjct: 491 KGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNS 550
Query: 674 LSEGETLHDFVAEDQRNKLVNHLDSVEQWLYDEGEDQNRQVYSDKLSELKTEGEPIKQRR 495
L + L D V + + + +WL D + Y DK EL+ PI +
Sbjct: 551 LDD-PNLKDKVDASDKEAIDKAVKETIEWL-DHNTTAAKDEYEDKQKELEGVANPIMAKI 608
Query: 494 LEFELRPG 471
+ PG
Sbjct: 609 YQAGGAPG 616
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 49.2 bits (112), Expect = 7e-07
Identities = 34/130 (26%), Positives = 56/130 (43%)
Frame = -3
Query: 854 EGSCETVEXPIEAQTHGLSVHELNGYVEQEGKMQAQDRQEKERADARNALEEYVYELRGK 675
+G+ +T + I LS E++ V + K +A+D E R A+N LE Y Y LR
Sbjct: 491 KGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNS 550
Query: 674 LSEGETLHDFVAEDQRNKLVNHLDSVEQWLYDEGEDQNRQVYSDKLSELKTEGEPIKQRR 495
L + L D V + + + +WL D + + K EL++ PI +
Sbjct: 551 LDD-PNLKDKVDASDKETVDKAVKETIEWL-DSNTTAAKDEFEAKQKELESVANPIMAKI 608
Query: 494 LEFELRPGAL 465
+ PG +
Sbjct: 609 YQAGGAPGGM 618
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 30.7 bits (66), Expect = 0.28
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 671 SEGETLHDFVAEDQRNKLVNHLDSVEQWLYDEGEDQNRQV 552
S+ ETLHD D N + + D V++ ++ ED+NR V
Sbjct: 1694 SQEETLHDAARSDSNNSMEDEEDDVDE---EDKEDKNRTV 1730
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 29.5 bits (63), Expect = 0.64
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -3
Query: 638 EDQRNKLVNHLDSVEQWLYDEGEDQN---RQVYSDKLSELKTEGEPIKQRRLEFELRPGA 468
ED R +N+L ++++ L ++N +YS+ + L + ++ RL F RPG+
Sbjct: 677 EDLREACLNYLINIKRLLLCPFSNRNFSSLDLYSNLIQHLLSANSSPRKSRLSFGGRPGS 736
Query: 467 LDEFALSI 444
+ +LS+
Sbjct: 737 PSKISLSL 744
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.84
Identities = 42/236 (17%), Positives = 97/236 (41%), Gaps = 1/236 (0%)
Frame = -3
Query: 773 EQEGKMQAQDRQEKERADARNALEEYVYELRGKLSEGETLHDFVAEDQRNKLVNHLDSVE 594
EQE K Q +RQ++E + E+ + + + + + + ++ K +
Sbjct: 649 EQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRR 708
Query: 593 QWLYDEGEDQNRQVYSDKLSELKTEGEPIKQRRLEFELRPGALDEFALSIQLTNKAVDLY 414
+ L E E++ R+ +K SE K +++ ++ P E + +++
Sbjct: 709 EKLDKEEEERRRRELLEKESEEKE--RRLREAKIAAFFAPNQTKEGSDGCTTSSQLGLFE 766
Query: 413 KAGDAKFSHLAETEVQKVIDASKNALTWLENARQALAHTPRHQQPSHTTHQIRQERQNFE 234
K GD + + ++D+ NA L A L +T + + +++ + +
Sbjct: 767 KKGD--LVNDEDKLSSHLLDSVPNA---LRQAPIGLKNTNNLSERNASSNLLNSSLFSSF 821
Query: 233 NLVHPILN-KVKPKEKTPPPSNQTAGDGQADGNKDAPSTQSARANGC*INASLENS 69
N V+P+++ + P +T S G+ +PS+ + +N +N + +S
Sbjct: 822 NSVNPLISLEPNPLNRTLNNSVNLTDFGRKPNGLHSPSSLLSNSNNFGLNPNARHS 877
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -3
Query: 299 TPRHQQPSHTTHQIRQERQNFENLVHPILNKVKPKE---KTPPPSNQTAGDGQADGNKDA 129
TPR + PS + ++R+ +L PIL K+K P S +A D KD
Sbjct: 314 TPRKRSPSSPVPLLAKKREGSPSLPIPILPKMKDTSIPAAEPASSTTSARDQTPSTPKDV 373
Query: 128 PSTQSARAN 102
S +A +
Sbjct: 374 GSPSTAETS 382
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -3
Query: 803 LSVHELNGYVEQEGKMQAQDRQEKERADARNALEEYVYELRGKLSE 666
LS ++ +E K + QD+ ++ +A++ LE Y+ + +SE
Sbjct: 513 LSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISE 558
>SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +3
Query: 591 LFNRIKMIDKLITLIFCNKIMQGFAFRQFPSQFVNIF 701
LFN IK DK +I M G AF FPS F+N F
Sbjct: 148 LFN-IKFTDKFQMVI----PMIGLAFSHFPSTFINAF 179
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 660 FAFRQFPSQFVNIFFKSITSICSFFLLPILSLHFALLFNISI*FMH 797
F F S F ++FF+ + +CSFF + S FA L F H
Sbjct: 5 FFFASLFSSFESLFFR-LFFVCSFFFPLLYSFIFATLHAFVFLFSH 49
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -3
Query: 296 PRHQQPSHTTHQIRQERQNFENLVHPILNKVKPKEKTPPPSN--QTAGDGQADGNKDAPS 123
P+H H T + + + + HP +++ + PP SN A QA+ ++ +
Sbjct: 296 PQHIPVPHNTEFAQYQPSSRDLQNHPTVDESRLSSVAPPASNTLNHANGNQAENASESST 355
Query: 122 TQSARANG 99
+QS + G
Sbjct: 356 SQSNDSQG 363
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -3
Query: 584 YDEGEDQNRQVYSDKLSELKTEGEPIKQRRLEFELRPGALDEFALSIQLTNKAVDL 417
Y G D + L++ GE + ++E +RP LD+F SI++ +V+L
Sbjct: 669 YYSGSDLTALAKDAAMGPLRSLGESLLFTKME-SIRPINLDDFKTSIKVIRPSVNL 723
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = -3
Query: 458 FALSIQLTNKAVDLYKAGDAKFSHLAETEVQKVIDASKNAL 336
FA+++++TN +D+ + D K L+E + +I+ KN+L
Sbjct: 289 FAINLRITNGTIDINVSPDKKSVFLSEED--SIIEFIKNSL 327
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 27.1 bits (57), Expect = 3.4
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 4/169 (2%)
Frame = -3
Query: 800 SVHELNGYVEQEGKMQAQDRQEKERADARNALEEYVYELRGKLSEGETLHDFVAEDQRNK 621
+V++L EQ + DRQ KE+ + EE + ELR KL +T +
Sbjct: 486 TVNKLTSLQEQNNEF---DRQLKEQEEDLQNKEEELTELR-KLLREQTQD----SQKLRL 537
Query: 620 LVNHLDSVEQWLYDEGEDQNRQVYSDKLSELKTEGEPIKQRRLE---FELRPGALDEFAL 450
LV L+ Q L GE+ + SD +++K+ + + E F+ + L+
Sbjct: 538 LVEQLELERQDLKQAGENHYSNLSSDYETQIKSLESSLTNSQAECVSFQEKINELNSQID 597
Query: 449 SIQL-TNKAVDLYKAGDAKFSHLAETEVQKVIDASKNALTWLENARQAL 306
++L N+A Y+ F + + + Q V + +L L+N Q L
Sbjct: 598 ELKLKLNEANKKYQELAISFEN-SNVKTQSVEPDNGLSLEALKNENQTL 645
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 329 LENARQALAHTPRHQ--QPSHTTHQIRQERQNFENLVHPILNKVKPKEKT 186
L+N R P H Q S T + RQN +NL+ + +++K ++ T
Sbjct: 25 LQNTRTLFTAPPLHSGLQTSFTAETQQHVRQNSQNLLKQLNDEMKARKYT 74
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/90 (18%), Positives = 39/90 (43%)
Frame = -3
Query: 455 ALSIQLTNKAVDLYKAGDAKFSHLAETEVQKVIDASKNALTWLENARQALAHTPRHQQPS 276
A ++ ++ V A +AK ++ + A TW + R+AL + +
Sbjct: 181 AAELRSKDEQVKELNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAAQL 240
Query: 275 HTTHQIRQERQNFENLVHPILNKVKPKEKT 186
T H+ +++Q + +++ V+ + KT
Sbjct: 241 QTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 41 GRRVLLFSVVSFLKMRLFNIHLLLQIESKAHPCY 142
GRR++LF VSFL L ++ LL Q + HP +
Sbjct: 215 GRRLVLFITVSFL--LLGDLWLLYQSYAPKHPYF 246
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = -3
Query: 296 PRHQQPSHTTHQIRQERQNFENLVHPILNKVKPKEKTPPPSNQTAGDGQADGNKDAPSTQ 117
P H +T ++N+++ + N + PP+ +++ + G++ TQ
Sbjct: 255 PSHDSAGASTFNTYFPNSTYQNILNSLDNNPAVLDLNGPPNQESSSSASSYGSR----TQ 310
Query: 116 SARANGC*IN 87
+ A C +N
Sbjct: 311 TPNARSCSLN 320
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 688 NCEGNCLKAKPCMILLQKI 632
+CEGN LK C++ LQ +
Sbjct: 886 DCEGNILKGNYCLVHLQSL 904
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 365 KVIDASKNALTWLENARQAL 306
KV++ + A TWLEN ++AL
Sbjct: 770 KVVERAHKADTWLENYKEAL 789
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,292,827
Number of Sequences: 5004
Number of extensions: 64532
Number of successful extensions: 274
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -