Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H17
(856 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 2.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 2.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 2.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 2.7
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 23 3.6
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 3.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.7
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 22 8.3
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 8.3
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 657 GFAFRQFPSQFVNIFFKSITSICSFFLLPILSL 755
G AF +PS + + SI S FF+L ++ L
Sbjct: 357 GLAFLVYPSAVLELPGSSIWSCLFFFMLILIGL 389
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.8 bits (49), Expect = 2.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 657 GFAFRQFPSQFVNIFFKSITSICSFFLLPILSL 755
G AF +PS + + SI S FF+L ++ L
Sbjct: 410 GLAFLVYPSAVLELPGSSIWSCLFFFMLILIGL 442
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.4 bits (48), Expect = 2.7
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 534 AQLITVHLSILVFTFIIEPLFNRIKMIDKLITLIFCNKIMQGFAFRQ 674
A LI + + + + IIEP R D+ ++ CN F F Q
Sbjct: 632 AALIALQIVLTLVWMIIEPPGTRFFYPDRKQVILKCNIQDMSFLFSQ 678
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.4 bits (48), Expect = 2.7
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 534 AQLITVHLSILVFTFIIEPLFNRIKMIDKLITLIFCNKIMQGFAFRQ 674
A LI + + + + IIEP R D+ ++ CN F F Q
Sbjct: 722 AALIALQIVLTLVWMIIEPPGTRFFYPDRKQVILKCNIQDMSFLFSQ 768
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 248 RQNFENLVHPILNKVKPK 195
RQ FEN V+ ILN + K
Sbjct: 195 RQTFENQVNRILNDARDK 212
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.0 bits (47), Expect = 3.6
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -1
Query: 820 KHKHMVYQCMN*MDMLNKRAKCKLKIGKRKKEQMLVMLLKNMFTNCEGNCLKAKPCM 650
K+ H Q ++ L + ++ +K+E +V L+N CE N K+ C+
Sbjct: 63 KNNHHCNQDTEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECE-NKEKSNVCL 118
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 210 IQNWMHEVLKILTFLTDLM 266
+Q +H +LK L F+TD M
Sbjct: 394 MQEELHTILKELRFITDRM 412
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 210 IQNWMHEVLKILTFLTDLM 266
+Q +H +LK L F+TD M
Sbjct: 394 MQEELHTILKELRFITDRM 412
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 210 IQNWMHEVLKILTFLTDLM 266
+Q +H +LK L F+TD M
Sbjct: 394 MQEELHTILKELRFITDRM 412
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 210 IQNWMHEVLKILTFLTDLM 266
+Q +H +LK L F+TD M
Sbjct: 394 MQEELHTILKELRFITDRM 412
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 210 IQNWMHEVLKILTFLTDLM 266
+Q +H +LK L F+TD M
Sbjct: 394 MQEELHTILKELRFITDRM 412
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 210 IQNWMHEVLKILTFLTDLM 266
+Q +H +LK L F+TD M
Sbjct: 394 MQEELHTILKELRFITDRM 412
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 210 IQNWMHEVLKILTFLTDLM 266
+Q +H +LK L F+TD M
Sbjct: 462 MQEELHTILKELRFITDRM 480
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 210 IQNWMHEVLKILTFLTDLM 266
+Q +H +LK L F+TD M
Sbjct: 462 MQEELHTILKELRFITDRM 480
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 699 FFKSITSICSFFLLPILSL 755
FF S+ I S+F+ P +S+
Sbjct: 10 FFLSVILITSYFVTPTMSI 28
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -3
Query: 332 WLENARQALAHTPRHQQPSHTTHQIRQERQ 243
WL NA + QP H + Q++Q
Sbjct: 88 WLANANSPVGSPSAALQPQHVVYGNPQQQQ 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,881
Number of Sequences: 438
Number of extensions: 4287
Number of successful extensions: 23
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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