Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H14
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 31 0.24
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.96
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 28 1.7
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 27 2.2
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 26 5.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.7
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 26 6.7
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 25 8.9
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 25 8.9
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 25 8.9
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 25 8.9
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = -1
Query: 364 EHKKETYHNDEYSARDETESRRTKDKRSRNAG------SDDDRKQRGHSSDE 227
EH + +Y ND + R+ T + R + + ++G DD R +GH DE
Sbjct: 199 EHSRRSYRNDRNNWRERTHNDRYRHRDKYDSGYFKKHYDDDMRFDQGHFQDE 250
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 0.96
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDET--ESRRT-KDKRSRNAGSDDDRKQRGHS 236
+ +HK+++ H ++ E+ ES+ KDK+ + +D ++ R HS
Sbjct: 594 ESKHKRDSKHEARPESKHESHRESKSAEKDKKDKKDKKEDSKRSRSHS 641
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 304 WTRSRLELNIHHCDMFPFCVRRPGRSFVSFPSLFHLXYCIQSP-VFYYLLHYSWSVSYPF 480
W RS + + + DM R+P RSF + P I P + Y+ +H S PF
Sbjct: 260 WNRSNFRIYLLNEDMIYMVGRKPKRSFFALPWAAGSHVYINIPSLSYWQVHPFTLASAPF 319
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 421 IQSPVFYYLLHYSWSVSYPFPCQLLCHHLXDFSYPFLSHCLYQYLYDCSRHDSF 582
+ SPVF+ L W + FP + +F+ FL LY +LY C ++ SF
Sbjct: 439 MMSPVFHQFLDCVWQIMDQFP------NCFEFNERFLRRLLY-HLYSC-QYGSF 484
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 355 FCVRRPGRSFVSF-PSLFHLXYCIQSPVFYYLLHYS 459
FC+ R + F PS FH Y I V +LLH++
Sbjct: 591 FCLARWNLGYNDFGPSAFHYNYNIGKFVVAWLLHWA 626
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 10 SGALPGPFPLFLGFVAATPIAYSLSSPSTSRRPHSVHSA 126
+GA+PG P GFV P + P++ +P A
Sbjct: 117 TGAIPGFAPQPTGFVQPQPTGFMSQQPASFMQPQRTGGA 155
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 98 PGDLIRCILPAXDIPAVVVVRSITLPPAASLVFVFPS 208
P L+ LP IPAV + ++ +PP + P+
Sbjct: 425 PAPLVTPSLPVPSIPAVPGMEAMAMPPGVTSSIAVPT 461
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQR 245
DD E+Y + +Y AR + R +++ R A + RK+R
Sbjct: 170 DDNRSVESYSSSDYQAR--SRRRFSEETTQRRAEIKEKRKKR 209
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -1
Query: 379 NARDDEHKKETYHNDEYSARDETESRRTKDKR-SRNAGSDDDRKQRGHSSDEG 224
N D E KKE + Y ++ S + + +GSDD Q +EG
Sbjct: 106 NMEDSEDKKEEDESSSYKNEFKSSSSASVSSNFEKTSGSDDHNSQSPVPLNEG 158
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDK 287
D+ ++ H D YS+ DE E RR+ ++
Sbjct: 209 DNYNENRRRHYDSYSSYDELERRRSSNE 236
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 460 WSVSYPFPCQLLCHHLXDFSYPFLSH 537
W+V +PF C LLC F FL H
Sbjct: 321 WNVFFPFCCTLLCLSPKQF---FLKH 343
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,887,024
Number of Sequences: 5004
Number of extensions: 31070
Number of successful extensions: 122
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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