Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_H14
(763 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 36 0.035
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 35 0.061
10_03_0002 - 6858257-6861205 32 0.43
07_01_0313 + 2216498-2216953 32 0.57
11_06_0710 - 26492093-26493460 31 1.3
03_06_0546 - 34646946-34647289,34647542-34647608 31 1.3
10_08_0442 + 17957358-17958075,17958156-17958242,17958547-179586... 30 1.7
03_05_0538 + 25368590-25368868 30 2.3
05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878 29 3.1
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 29 3.1
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 29 3.1
06_02_0208 - 13026296-13026654,13027394-13027497,13028109-130282... 29 4.0
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 29 5.3
12_02_0814 - 23410278-23411854,23411933-23412166,23412688-234127... 29 5.3
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 29 5.3
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 29 5.3
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 29 5.3
05_04_0054 + 17526545-17527096 29 5.3
05_01_0106 + 702504-702687,702856-703037,703070-703933 29 5.3
11_06_0284 + 21909758-21913645 28 7.1
08_02_1572 - 27952418-27952727,27952872-27953133,27954018-279541... 28 7.1
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768... 28 7.1
01_06_1495 + 37769982-37771496 28 7.1
12_01_0478 + 3752617-3753006,3753708-3753780,3753892-3753959,375... 28 9.3
07_01_0463 + 3502708-3503535 28 9.3
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 28 9.3
01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 28 9.3
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -1
Query: 373 RDDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDE 227
RDD+ + +D + R + + + KR DDDR++R H D+
Sbjct: 11 RDDDDRHHRSRDDHHRRRHDADDDHRRHKRGGGGDDDDDRRRRRHHRDD 59
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 316 ETESRRTKDKRSRNAGSDDDRKQRGHSSDEGRR 218
+ SRR +D R+ S DD +R H +D+ R
Sbjct: 4 DRSSRRPRDDDDRHHRSRDDHHRRRHDADDDHR 36
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 35.1 bits (77), Expect = 0.061
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 361 HKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDEGR 221
HK E Y++D S+R SRR+++KR + S + + S E R
Sbjct: 501 HKDEQYYSDSSSSRSNRHSRRSREKRYYSDSSSPEHNRHSGRSKEKR 547
>10_03_0002 - 6858257-6861205
Length = 982
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -1
Query: 376 ARDDEHKKETYHN---DEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDEGRR 218
AR+ E ++ET +E A+++ RR + +R R A +DR+QR + + GRR
Sbjct: 209 ARETEARRETERRRLEEERQAQEQERLRREQQERERTAKEAEDRRQR--ALEAGRR 262
>07_01_0313 + 2216498-2216953
Length = 151
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 83 AVPVPPGDLIRCILPAXDIPAVVVVRSITLPPAASL 190
AVP P I I+PA +P + V +TLPP ++
Sbjct: 45 AVPAMPKPTIPTIVPAVTLPPIPAVPKVTLPPMPAI 80
>11_06_0710 - 26492093-26493460
Length = 455
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDK-RSRNAGSDDDRKQRGHSSDE 227
DD+ +K++ + S DE + +++K K ++ + DD +K + SSDE
Sbjct: 153 DDDAEKKSKKKSKNSDDDEDDKKKSKKKPKNPDDDEDDKKKSKKKSSDE 201
>03_06_0546 - 34646946-34647289,34647542-34647608
Length = 136
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 535 HCLYQYLYDCSRHDSFHHPXDSSC 606
HCLY Y DSFH P D C
Sbjct: 65 HCLYSCCYRGKMRDSFHLPEDPCC 88
>10_08_0442 +
17957358-17958075,17958156-17958242,17958547-17958647,
17958766-17958834,17958989-17959156
Length = 380
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -1
Query: 379 NARDDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDEGRRE 215
NAR + H+D +S+ +SRR D R + DD RGH RE
Sbjct: 40 NARSGRGHEYVRHSDRHSSGAPRDSRRHDDYRRYHDKRGDD-NDRGHRISRSERE 93
>03_05_0538 + 25368590-25368868
Length = 92
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 373 RDDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQR 245
++DEHKKE H+ + E + KDK + + G + K++
Sbjct: 21 KEDEHKKEGEHHKKDGEHKEGVVEKIKDKITGDHGDGGEHKEK 63
>05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878
Length = 402
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDR---KQRGHSSDEGR 221
DD+ +E ND S DE++ + KR R G R + R S++GR
Sbjct: 340 DDDDDEENDDNDSDSDYDESDEEEEERKRKRGKGIGSGRGRGRGRASGSEKGR 392
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = -1
Query: 373 RDDEHKKETYHNDEYSARDETESRRTKDK-------RSRNAGSDDDRKQRGHSSDEGRRE 215
RD + ++ D RD+ + RR++D+ + R + DR++R S E RR+
Sbjct: 93 RDRDRDRDRDEKDREKERDKDKERRSRDREKEKEKEKEREREREKDRERRSRSRSERRRD 152
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDE 227
D++ +E N+E R+ET++RR + +R R + + +E
Sbjct: 74 DEKDLEEMRRNEEEERREETQTRRRRRRRGRKPKRPAEESEEDEEEEE 121
>06_02_0208 -
13026296-13026654,13027394-13027497,13028109-13028200,
13028418-13028774,13029932-13030109,13030454-13030507,
13030701-13030784,13031521-13031714
Length = 473
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 19 LPGPFPLFLGFVAATPIAYSLSSPSTSRRPH 111
+P P P + F+ P+A S+PST R+ H
Sbjct: 52 MPTPRPWPVAFIPPKPVAEIKSTPSTKRKKH 82
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -1
Query: 373 RDDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDE 227
RDD HK T +YS D + R RSR G D +R RG S+E
Sbjct: 368 RDDRHKDST--RSKYSTSDSHKHR----SRSRERGRDAER--RGQRSEE 408
>12_02_0814 -
23410278-23411854,23411933-23412166,23412688-23412725,
23412872-23412948
Length = 641
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 376 ARDDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDD 257
ARDDEH + S RD E + + +R AG DD
Sbjct: 544 ARDDEHTEHAGSGLHASDRDTIEEHSSGEPGNRMAGRGDD 583
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -1
Query: 367 DEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDEGR 221
D + +H D RD R + R+ + DR+ R D GR
Sbjct: 329 DSKEDRHHHRDRDRTRDRERGRDRERDHGRDRDRERDRRDRDRDRDRGR 377
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -1
Query: 364 EHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDEGRRE 215
EHK+E + +S + ++ R+A S+DD ++ +G+RE
Sbjct: 231 EHKREEKRSRHDKKDHGQDSEDDERRKRRHATSEDDEPRKSQKEKKGQRE 280
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = -1
Query: 379 NARDDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSD--DDRKQRGHSSD---EGRR 218
+++ D+H+ + + ++ + K KRS + SD D K G SSD EGRR
Sbjct: 223 SSKKDKHRSAKGKSKHKKTKRKSRGTKRKSKRSYRSSSDDSDSSKTGGSSSDSESEGRR 281
>05_04_0054 + 17526545-17527096
Length = 183
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 310 ESRRTKDKRSRNAGSDDDRKQRGHSSDEGRRE 215
E RRT+ + + A DDD +Q G EG+ E
Sbjct: 137 EKRRTEKEAAAAAAEDDDDEQEGGEVVEGKEE 168
>05_01_0106 + 702504-702687,702856-703037,703070-703933
Length = 409
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDEGRR 218
D + E DEY+ DE E + S A DDD G DEGR+
Sbjct: 15 DPVSEPEESSGDEYAQSDE-EVEANVEGASEEASGDDD-SGSGEDEDEGRK 63
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = -1
Query: 373 RDDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDEGRRE 215
R +E K E + E E + KDK + G ++RK+ H + + +
Sbjct: 434 RKEEEKNEGEEENGEEEGKEKELKGRKDKEKKEKGGREERKEEEHHEKQEKEK 486
>08_02_1572 -
27952418-27952727,27952872-27953133,27954018-27954107,
27955653-27955695
Length = 234
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSD 230
+ E K+E + + RD+ E R + R+ D+ +R H SD
Sbjct: 186 EKERKRERHSEGKERRRDKQEKRSRHESDDRSKRHRKDKHKRRHDSD 232
>02_04_0480 -
23274945-23275196,23275558-23275623,23276709-23276851,
23276947-23277063,23277219-23278683,23279561-23280730
Length = 1070
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -1
Query: 379 NARDDEHKKETYHNDEYSARDETE----SRRTKDKRSRNAGSDDDRKQRGHSSDE 227
N R+D +++ +D+ D+ E SR K SRN ++ RK++ SD+
Sbjct: 118 NLRNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRKCSDD 172
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQR 245
DDE KK + + + + R++ + + K G D+++K+R
Sbjct: 104 DDEEKKCSRQDMKKNLRNDADEEKRKSSDDMRDGDDEEKKKR 145
>01_06_1495 + 37769982-37771496
Length = 504
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 352 PFCVRRPGRSFVSFPSLF 405
P C RPG+SF +FP LF
Sbjct: 24 PPCFARPGQSFPAFPPLF 41
>12_01_0478 +
3752617-3753006,3753708-3753780,3753892-3753959,
3754577-3754665,3755108-3755305,3755383-3755527,
3755673-3755840,3756174-3756341,3756527-3756717,
3757128-3757266
Length = 542
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 283 FSCP*FSWTRSRLELN--IHHCDMFPFCVRRPGRSFVSFP 396
F P W R + + +HH DM +R+P S +FP
Sbjct: 491 FDDPNIRWNRFKRHMQDILHHSDMRGTALRKPNDSIYTFP 530
>07_01_0463 + 3502708-3503535
Length = 275
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/48 (20%), Positives = 26/48 (54%)
Frame = -1
Query: 358 KKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHSSDEGRRE 215
KK+ H+DE + E + K+ ++ ++ +K++ +EG+++
Sbjct: 90 KKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGDEEEGKKK 137
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 373 RDDEHKKETYHNDEYSARDETESRRTK-DKRSRNAGSDDDRKQRGHSSDEGRRE 215
+ DE T +DE DE E TK D+ + G DD + G D+ E
Sbjct: 212 QQDEDLDVTSSDDEDFVADEEEVEDTKEDEYTDEDGDSDDDEDEGEEDDDDEGE 265
>01_01_1206 -
9702128-9702184,9702272-9702323,9702410-9702471,
9702578-9702665,9703027-9703095,9703224-9703281,
9703895-9703996,9704075-9704179,9704273-9704624,
9706005-9706100,9706427-9706501,9707192-9707370,
9707501-9707740,9707922-9708017,9708193-9708306,
9708428-9708527
Length = 614
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 370 DDEHKKETYHNDEYSARDETESRRTKDKRSRNAGSDDDRKQRGHS 236
DD HK Y ++++S + E D+ + SDDD+K HS
Sbjct: 376 DDRHK---YDDEDFSHESDDEYVDDHDEHVASYKSDDDQKGDDHS 417
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,963,178
Number of Sequences: 37544
Number of extensions: 248638
Number of successful extensions: 1174
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -