Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_H03
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   3.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   8.7  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   8.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   8.7  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 434 YTNLYSKFHXIYQTLKLR 381
           Y NLY+K+H  Y   +++
Sbjct: 718 YANLYTKYHGQYPNTQIQ 735


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 443 YLVYTNLYSKFHXIYQTLKLRRRYFKDNLQ 354
           Y+V TN  SK+   Y   + +  YF ++++
Sbjct: 200 YIVNTNYSSKYMREYNDPEYKLDYFMEDVE 229


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 367 KTIYKK*ENHMYKKFEPKVKKNL*EKT 287
           +T Y K     + ++ P+   NL EKT
Sbjct: 384 ETYYSKHNTQQFTQYIPESSSNLQEKT 410


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 343 NHMYKKFEPKVKKN 302
           NH+  KFEP +  N
Sbjct: 185 NHLMTKFEPDLDMN 198


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 128 SCSITWQHHE 157
           SCS++W+ H+
Sbjct: 48  SCSVSWEVHD 57


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 309  KKIFKKKLYVIVEIP*KRSYLSYKLKS 229
            KK++K+  Y++ E      Y S+  KS
Sbjct: 940  KKVYKQNDYIVDESSSSSFYSSFLYKS 966


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,621
Number of Sequences: 438
Number of extensions: 2119
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)