Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_G24
         (563 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-2|CAB01412.1|  120|Caenorhabditis elegans Hypothetical pr...    92   2e-19
AL132860-2|CAB60512.1|  117|Caenorhabditis elegans Hypothetical ...    77   1e-14
Z71259-9|CAA95795.1|  146|Caenorhabditis elegans Hypothetical pr...    47   8e-06
AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical ...    28   4.0  
AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical ...    28   4.0  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z78012-2|CAB01412.1|  120|Caenorhabditis elegans Hypothetical
           protein C52E4.2 protein.
          Length = 120

 Score = 92.3 bits (219), Expect = 2e-19
 Identities = 40/113 (35%), Positives = 65/113 (57%)
 Frame = -1

Query: 437 MPHFRIETNISRSKIPTDFVVKAIPVLAKALGKPEQYCVVTVIPEMLMSFGGSTEPCAIA 258
           MP  R+ TN+   K+P DF ++   +LA+++GKP +   V +     +  G + +P  + 
Sbjct: 1   MPMVRVATNLPNEKVPVDFEIRLTDLLARSMGKPRERIAVEIAAGARLVHGATHDPVTVI 60

Query: 257 NLMSIGSLGVEQNKKHAKVLFELVEKELGVPTDRMYITFQDEPTGXVGFKGTT 99
           ++ SIG++  E N ++   + E   KELG+P D++ ITF D P   VGF GTT
Sbjct: 61  SIKSIGAVSAEDNIRNTAAITEFCGKELGLPKDKVVITFHDLPPATVGFNGTT 113


>AL132860-2|CAB60512.1|  117|Caenorhabditis elegans Hypothetical
           protein Y56A3A.3 protein.
          Length = 117

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
 Frame = -1

Query: 437 MPHFRIETNISRSKIPTDFVVKAIP-VLAKALGKPEQYCVVTVIPEMLMSFGGSTEPCAI 261
           MP F I  N+       + ++K +  VL K L KPEQY  +    +  + + G+TEP   
Sbjct: 1   MPVFSINVNVKVPAEKQNEILKELSTVLGKLLNKPEQYMCIHFHEDQGILYAGTTEPAGF 60

Query: 260 ANLMSIGSLG-VEQNKKHAKVLFELVEKELGVPTDRMYITFQDEPTGXVGFKGTTF 96
           A L SIG +G  +QN   + V+F ++EK LG+P +R+YI F +     + + G TF
Sbjct: 61  AVLKSIGGVGSAKQNNAISAVVFPIIEKHLGIPGNRLYIEFVNLGAADIAYNGQTF 116


>Z71259-9|CAA95795.1|  146|Caenorhabditis elegans Hypothetical
           protein F13G3.9 protein.
          Length = 146

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 28/111 (25%), Positives = 54/111 (48%)
 Frame = -1

Query: 437 MPHFRIETNISRSKIPTDFVVKAIPVLAKALGKPEQYCVVTVIPEMLMSFGGSTEPCAIA 258
           MP  +++TN+   K+   F V+    +AK + +PE    V++     M+ G  T+P A+ 
Sbjct: 1   MPVIKVQTNVK--KVSDGFEVRLAIHMAKVMKRPESQIFVSLDMNSRMTRGQLTDPLAVL 58

Query: 257 NLMSIGSLGVEQNKKHAKVLFELVEKELGVPTDRMYITFQDEPTGXVGFKG 105
           ++ S   L     +++   L E   +EL + +D + I ++      +GF G
Sbjct: 59  DVTSSTVLTPILTEEYTVALCEFFSQELALDSDAVLINYRSLSPELIGFNG 109


>AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical
           protein F18A12.8b protein.
          Length = 816

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 525 DIEKIVNFAFLLNKSTSSRLKHNNNLKLYN 436
           DIEKI++F   L K   +  +  NN +LYN
Sbjct: 375 DIEKIIDFEIELAKIIVAEDERRNNTRLYN 404


>AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical
           protein F18A12.8a protein.
          Length = 848

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 525 DIEKIVNFAFLLNKSTSSRLKHNNNLKLYN 436
           DIEKI++F   L K   +  +  NN +LYN
Sbjct: 375 DIEKIIDFEIELAKIIVAEDERRNNTRLYN 404


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
           protein T01D3.7 protein.
          Length = 2882

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -1

Query: 296 MSFGGSTEPCAIANLMSIGSLGVEQNKKHAKVLFELVEKELGVPTDRMYIT 144
           + F G     +I N+   G + +  NK     + ++V+    VP+  ++IT
Sbjct: 169 IDFDGGDSVVSIKNVNENGKISISNNKFTKNTMHDIVKLLESVPSSEIFIT 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,983,069
Number of Sequences: 27780
Number of extensions: 273339
Number of successful extensions: 661
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)