Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_G23
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical ...    31   0.62 
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    29   1.9  
M22751-1|AAA28106.1|  211|Caenorhabditis elegans protein ( C.ele...    28   5.8  
L15201-2|AAA27945.2|  200|Caenorhabditis elegans Male abnormal p...    28   5.8  
AF277990-1|AAG00458.1|  200|Caenorhabditis elegans MAB-5 protein.      28   5.8  
AL021503-9|CAA16417.2|  572|Caenorhabditis elegans Hypothetical ...    27   7.7  

>AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical
           protein Y97E10AL.2 protein.
          Length = 345

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
 Frame = -2

Query: 564 YLIRLTIGNLXXLIREDQRVXYIXW---IGHNENDTSCPVRVKTHIFAASEP*EDDDTVR 394
           ++I   + ++   +R D+R+  +     I H E+D   PV++   ++ A++  E D  +R
Sbjct: 246 HIIIRPLNSVGLTMRSDKRIRLVSCPIIILHAEDDKILPVKLGRALYEAAKDAERDIKIR 305

Query: 393 STPSHHRSRPVHV*RTPDDPQPV*TRLGQTSTPTT 289
              S +      + R P+ P+ +   +G  + P+T
Sbjct: 306 EFSSDYGLGHKFICRYPELPEIIEEFVGSVTPPST 340


>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 231  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYARRGQAE 371
            ++TFCF     LR     G+ + Y+F     +L +D +   R    E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 231  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYARRGQAE 371
            ++TFCF     LR     G+ + Y+F     +L +D +   R    E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 231  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYARRGQAE 371
            ++TFCF     LR     G+ + Y+F     +L +D +   R    E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 231  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYARRGQAE 371
            ++TFCF     LR     G+ + Y+F     +L +D +   R    E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244


>M22751-1|AAA28106.1|  211|Caenorhabditis elegans protein (
           C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
          Length = 211

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 359 WTGRDRWWLGVERTVSSSSHGS 424
           WTG D +W G   T SS S  S
Sbjct: 18  WTGDDSYWAGAGTTASSQSASS 39


>L15201-2|AAA27945.2|  200|Caenorhabditis elegans Male abnormal
           protein 5 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 359 WTGRDRWWLGVERTVSSSSHGS 424
           WTG D +W G   T SS S  S
Sbjct: 7   WTGDDSYWAGAGTTASSQSASS 28


>AF277990-1|AAG00458.1|  200|Caenorhabditis elegans MAB-5 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 359 WTGRDRWWLGVERTVSSSSHGS 424
           WTG D +W G   T SS S  S
Sbjct: 7   WTGDDSYWAGAGTTASSQSASS 28


>AL021503-9|CAA16417.2|  572|Caenorhabditis elegans Hypothetical
           protein Y68A4A.5 protein.
          Length = 572

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 41  WRRYYTITHXNEALKINKLHFILFKHNP 124
           W  +YTI   NE L    +H ++ KH P
Sbjct: 259 WSLFYTIHSLNEKLFHEDVHSVVDKHEP 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,268,506
Number of Sequences: 27780
Number of extensions: 243893
Number of successful extensions: 545
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)