Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_G13
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr...    34   0.093
AF026204-5|AAB71249.1|  239|Caenorhabditis elegans Hypothetical ...    29   0.54 
Z48055-4|CAA88132.2|  301|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical ...    29   3.5  
AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical ...    29   3.5  
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AF016450-5|AAB65984.2|  280|Caenorhabditis elegans Serpentine re...    28   6.1  

>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical protein
            R03G5.3 protein.
          Length = 1311

 Score = 33.9 bits (74), Expect = 0.093
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -3

Query: 510  IWCETDYYLYIXNIVFVLFTHTISTQENLSVYHFN-VHFYMARKHENIIIH-KYLHKITD 337
            ++ E+ ++ Y    VF+ F  T   Q +++ +HF  V   +    EN+ ++  Y+H   D
Sbjct: 1023 VFRESIFFFYKLYFVFISFCATFQEQRSVNFFHFEIVTLILLTMSENLFVNIDYIHIFDD 1082

Query: 336  KNVTIVFTVVPIVRN 292
                I F +  I  N
Sbjct: 1083 NGFAIPFGLRSIFLN 1097


>AF026204-5|AAB71249.1|  239|Caenorhabditis elegans Hypothetical
           protein C30E1.4 protein.
          Length = 239

 Score = 28.7 bits (61), Expect(2) = 0.54
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -3

Query: 411 FNVHFYMARKHENIIIHKYLH 349
           FNV+FY A+   NI++H+ +H
Sbjct: 88  FNVNFYHAKTIHNIVLHQPIH 108



 Score = 21.4 bits (43), Expect(2) = 0.54
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -3

Query: 528 NVQTFPIWCETDYYLYIXNIVFVLFTHTISTQENLSVYHFNVH 400
           N+ T   +C+ D Y +  N+        ++T+ +L    F VH
Sbjct: 8   NIITIFHYCKADDYHHFQNLTLGESYTNLTTKGDLITSLFTVH 50


>Z48055-4|CAA88132.2|  301|Caenorhabditis elegans Hypothetical
           protein T07A5.2 protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 513 PIWCETDYYLYIXNIVFVLFTHTISTQENLSVYHFNVHFYMARKHE 376
           PI  +T Y+LY  + +F+ F  T++   N+S    N +   A  H+
Sbjct: 248 PILHKTQYFLYPISFIFMFFVATLTGGWNISRTALNFYHSRAEPHK 293


>AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5a protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 579 FDS-GIMLK*RXKKST*ENVQTFPIWCETDYYLYIXNIVFVLFTHTISTQENL 424
           FDS  + L+ R      E + T P  C  + +LYI  I  +L + TIS   NL
Sbjct: 537 FDSVNVELENRDSNVKTEQLSTSPETCSEEKHLYIVVITVLLVSVTISLVSNL 589


>AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5b protein.
          Length = 601

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 579 FDS-GIMLK*RXKKST*ENVQTFPIWCETDYYLYIXNIVFVLFTHTISTQENL 424
           FDS  + L+ R      E + T P  C  + +LYI  I  +L + TIS   NL
Sbjct: 539 FDSVNVELENRDSNVKTEQLSTSPETCSEEKHLYIVVITVLLVSVTISLVSNL 591


>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
           protein K09H11.3 protein.
          Length = 1085

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 468 VFVLFTHTISTQENL-SVYHFNVHFYMARKHENIIIHKYLHKITDKNVTIVF 316
           VF +   TI  Q  L S  H +   Y+ R+   I  H   HK++ +N+ IVF
Sbjct: 168 VFYMEDRTIEQQTPLLSDAHASTLGYVMRQLNRIAAHSEQHKMSIENLAIVF 219


>AF016450-5|AAB65984.2|  280|Caenorhabditis elegans Serpentine
           receptor, class t protein68 protein.
          Length = 280

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 185 FITTPFIMWLKILLKVYITVIVIGC*FN*GIFFSLQLRTIGTTVKTIVTFLSVI 346
           FIT+P +++ KIL    + V VIGC  N      L + ++  +V  ++ F + I
Sbjct: 73  FITSPVLVFPKILKGYEVIVRVIGCMINSSWIGDLPMMSL-LSVSRVLIFTNTI 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,449,734
Number of Sequences: 27780
Number of extensions: 276300
Number of successful extensions: 615
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)