Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_G01
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0665 + 19818500-19819013,19819169-19819260,19819435-198200...    29   5.3  
01_01_0091 - 719842-720902,721042-721071,721521-722226                 28   9.3  

>08_02_0665 +
           19818500-19819013,19819169-19819260,19819435-19820056,
           19820575-19820775,19821327-19821395,19821428-19821522,
           19821608-19822153
          Length = 712

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 651 VNGKHFMGMPIKNQNSVDSTNQDDT**YSIPIMDFLCKLIGKMV 520
           VN   F  M ++N  SV +  QD     S+ I+  LC L+G ++
Sbjct: 477 VNNSSFSKMSLQNMCSVPAQLQDGLGTTSVSIIAVLCALLGSVI 520


>01_01_0091 - 719842-720902,721042-721071,721521-722226
          Length = 598

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +3

Query: 174 ILSCMTIVPLFKKQSQNCFLKKI*GCQCSTTSRVQNKFKYSKPNQCS 314
           I   + IVPL +  SQ C L+KI     ST+   Q  F+Y+    CS
Sbjct: 71  IYGVINIVPLAESWSQ-CALQKIISANYSTSVYKQYGFQYASLVSCS 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,951,923
Number of Sequences: 37544
Number of extensions: 313876
Number of successful extensions: 442
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)