Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_F21
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   3.6  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   3.6  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   4.7  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 463 SIKLKIKQYXIIHHVSFHICNSLKLYNFNKK 371
           S K+K+     + H+ F +C S+  +NF KK
Sbjct: 531 SYKMKLSIIFGVVHMIFGVCMSVVNHNFFKK 561


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 91  H*FQKNGHCVRDC*EKSSTTRTY*TNVQYS 2
           H  +K GH  RDC  +S+ T T  T   YS
Sbjct: 205 HRCRKPGHMKRDCPMESNNTPTSTTMRDYS 234


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 82  ETNVHCNVACYKKRLPIVHFAQYPWPMRNEISSVIEFIFHKLHTYNKINLES 237
           ET +H    C  ++   ++  +YP  +R  + + I+   H   TY   N++S
Sbjct: 2   ETRLHQLPPCILEQFHFLNDLKYPVLIRQHLGNWIKDSLHNAPTYTN-NMQS 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,918
Number of Sequences: 2352
Number of extensions: 8488
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)