Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_F21
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical p... 30 1.2
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p... 30 1.2
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein. 30 1.2
AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical... 29 2.1
AC006648-3|AAF39855.1| 216|Caenorhabditis elegans Hypothetical ... 28 4.9
Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical p... 28 6.5
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 186 YYTRDLVSHWPRILCEMNDR*SFFVACNITVNISFKKMV 70
+ T+DL+ + LCE DR F A ++ V+IS+ KMV
Sbjct: 788 FSTKDLILSYYDSLCEKIDRTRFGNAPHVDVHISYVKMV 826
>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 186 YYTRDLVSHWPRILCEMNDR*SFFVACNITVNISFKKMV 70
+ T+DL+ + LCE DR F A ++ V+IS+ KMV
Sbjct: 788 FSTKDLILSYYDSLCEKIDRTRFGNAPHVDVHISYVKMV 826
>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 186 YYTRDLVSHWPRILCEMNDR*SFFVACNITVNISFKKMV 70
+ T+DL+ + LCE DR F A ++ V+IS+ KMV
Sbjct: 788 FSTKDLILSYYDSLCEKIDRTRFGNAPHVDVHISYVKMV 826
>Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 186 YYTRDLVSHWPRILCEMNDR*SFFVACNITVNISFKKMV 70
+ T+DL+ + LCE DR F A ++ V+IS+ KMV
Sbjct: 788 FSTKDLILSYYDSLCEKIDRTRFGNAPHVDVHISYVKMV 826
>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 186 YYTRDLVSHWPRILCEMNDR*SFFVACNITVNISFKKMV 70
+ T+DL+ + LCE DR F A ++ V+IS+ KMV
Sbjct: 788 FSTKDLILSYYDSLCEKIDRTRFGNAPHVDVHISYVKMV 826
>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 186 YYTRDLVSHWPRILCEMNDR*SFFVACNITVNISFKKMV 70
+ T+DL+ + LCE DR F A ++ V+IS+ KMV
Sbjct: 788 FSTKDLILSYYDSLCEKIDRTRFGNAPHVDVHISYVKMV 826
>AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical
protein Y102A5C.36 protein.
Length = 213
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 267 FMFIDY*STAKIFLELAFELFKLNLTQKYIYLFFVFLLKL 386
F++ IF+ L LF L L ++YI+ FF FLLKL
Sbjct: 54 FLYFSPNCVETIFVSLGRNLF-LCLQRRYIHCFFHFLLKL 92
>AC006648-3|AAF39855.1| 216|Caenorhabditis elegans Hypothetical
protein F59H6.6 protein.
Length = 216
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 469 RRSIKLKIKQYXIIHHVSFHICNSLKLYNFNKKTKNRYIYFC 344
R + L I +Y ++ SF LKL NF+KK ++ C
Sbjct: 111 RSELLLNIIRYKMLQFNSFQF-QDLKLLNFSKKNSKLLLFLC 151
>Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 71 TIFLKLMFTVMLHATKNDYLSFISHNILGQCET 169
TIF+ +M ++ + AT DYL ++NI ET
Sbjct: 126 TIFMGIMISIAILATSVDYLRETTYNIPSDKET 158
>Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 71 TIFLKLMFTVMLHATKNDYLSFISHNILGQCET 169
TIF+ +M ++ + AT DYL ++NI ET
Sbjct: 126 TIFMGIMISIAILATSVDYLRETTYNIPSDKET 158
>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical
protein K12D12.2 protein.
Length = 1696
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +2
Query: 77 FLKLMFTVMLHATKNDY----LSFISHNILGQCETRS 175
F+KLM T+++H + +Y + F++ +IL TRS
Sbjct: 703 FVKLMTTLLMHRSLPEYATPFIQFVTRSILAHFSTRS 739
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,340,065
Number of Sequences: 27780
Number of extensions: 192254
Number of successful extensions: 412
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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