Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_F21
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    24   1.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.5  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   4.4  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    21   7.7  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 551 EHDFCGSKLIDVPTSSRHFSEDHHYK 628
           E    G K  + P   + F+ DHH K
Sbjct: 1   ERTHTGEKPFECPECHKRFTRDHHLK 26


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 147 ISLANAKRDL-ECNRIHIS*TTYI 215
           ++LAN    L E  RIH+S TTYI
Sbjct: 611 VTLANKFESLSEPLRIHVSPTTYI 634


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 127 PIVHFAQYP 153
           P++HF QYP
Sbjct: 33  PVIHFLQYP 41


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 68  MTIFLKLMFTVMLHATKNDY 127
           +TI + L+FTV+   +  DY
Sbjct: 3   ITILILLVFTVLATVSSQDY 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,876
Number of Sequences: 438
Number of extensions: 2454
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)