Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_F18
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    26   1.4  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    25   1.9  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    25   1.9  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   5.7  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   7.5  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   10.0 

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = +3

Query: 540 EREDGLHESLSHHV--VEHRGHMVHCDSAE-GHPEDPVELGGHE--GKPGLRHGLGERLA 704
           E  + +H  + HH+     +   V   S   GHPE P+ +GG E   K  +R+ LG  + 
Sbjct: 684 EAVERVHAWMRHHLQLAPEKTECVMISSLRRGHPEIPIRVGGLEIRSKQAIRY-LGVMIH 742

Query: 705 PH 710
            H
Sbjct: 743 DH 744


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 174 RAPGGTIRAHGVPVRLHGAGRAEAHGP 94
           R PG  +   G  +R+H + R  A+ P
Sbjct: 53  RVPGWRLSTSGASIRMHASARKRAYCP 79


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 15/64 (23%), Positives = 27/64 (42%)
 Frame = +3

Query: 210 DGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAALGTEAA 389
           + K +S  +    ++ D++PE   RG H        +G    +R  R+ D      TE  
Sbjct: 93  NSKSESNNLSLSLSLVDMIPEEKLRGRHSSESDREGMGHDSHKRTHRLSDSDGG-STEGC 151

Query: 390 SVDI 401
           + D+
Sbjct: 152 NYDL 155


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 81  QDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREV 200
           Q  Q+ H   H  +H+  Q H+     HP H  V  + E+
Sbjct: 305 QQQQQQH---HHHQHQPQQQHQQQYHSHPHHTPVQFKTEL 341


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 84  DPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREVVPGDGKGDSRQVRYEAA 251
           +P   H LRH++   A   H +    HPE  V + E     G  +G+   +R + A
Sbjct: 5   EPLVHHHLRHLRVLAAAADHHLLVHLHPEGCVRSREEHARAGQ-EGNVASLRTQEA 59


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 24  ELAVPRVELRVVLADEHVPQDPQR 95
           E+   R+  RVV  D+H P  P R
Sbjct: 294 EMRKVRLAARVVCVDQHRPSIPSR 317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,828
Number of Sequences: 2352
Number of extensions: 16514
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)