Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_F12
         (351 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   1.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   1.4  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   1.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   2.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   2.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   2.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   3.3  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    22   5.8  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            22   7.6  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 141 TFHIREVHSGHSGLRQDL 88
           TFH+ +V SGH  LR+ L
Sbjct: 928 TFHLSQVLSGHGFLREYL 945


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 236 RWCRRKCDRIPRSPQRRVATQRFATSSWQMAL 331
           +WCRR  DR+ R   + + T  F ++S ++A+
Sbjct: 811 QWCRRILDRVQRLLAQGI-TSAFHSTSCEVAV 841


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 236 RWCRRKCDRIPRSPQRRVATQRFATSSWQMA 328
           R CRR  +R+ R   RRVA + F T  ++ A
Sbjct: 868 RECRRLLERVQRVSARRVA-RTFRTVRYETA 897



 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 141  TFHIREVHSGHSGLRQDL 88
            TFH+ +V SGH   R+ L
Sbjct: 980  TFHLAQVLSGHGFFREYL 997


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 141  TFHIREVHSGHSGLRQDL*H 82
            TFH+ +V SGH   R  L H
Sbjct: 976  TFHLAQVLSGHGFFRDYLCH 995


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 138 FHIREVHSGHSGLRQDL 88
           FH+ +V SGH   R DL
Sbjct: 938 FHLSQVLSGHGFFRDDL 954


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 141  TFHIREVHSGHSGLRQDL 88
            TFH+ +V SGH   R+ L
Sbjct: 988  TFHLSQVLSGHGFFREHL 1005


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 15   LALHAELDEVIADS 56
            L +HAE DEVI DS
Sbjct: 1250 LIIHAEEDEVIEDS 1263


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 141 TFHIREVHSGHSGLRQDL*HRFCEHH 64
           T H  EVH  +S L  D  HR  ++H
Sbjct: 112 TRHGDEVHGQYSLLDSDGHHRIVDYH 137


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 170  ENLHFSLPHVPSIFGRS 120
            + L F++PH P + G S
Sbjct: 1025 DKLRFAMPHPPKVRGAS 1041


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,851
Number of Sequences: 2352
Number of extensions: 7355
Number of successful extensions: 31
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)