Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_F07
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23646-2|AAK67235.1|  304|Caenorhabditis elegans Hypothetical pr...    71   1e-12
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z75552-6|CAA99939.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>L23646-2|AAK67235.1|  304|Caenorhabditis elegans Hypothetical
           protein F44E2.10 protein.
          Length = 304

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = -2

Query: 881 HTIVADLDIFDKVG-RGVAHDXYIPYTIKXGKLYYNEEESDIRGGKIKVEFIKGYRDNPK 705
           H  V +LDIFD  G RG AHD YIP  IK   +  +    + +G K+ +E  KG  DNPK
Sbjct: 140 HLAVKNLDIFDAAGGRGFAHDVYIPVVIKGSSISVSGHSREYKG-KVIIELSKGPHDNPK 198

Query: 704 INALYVMTGTIDEVPKLPPLVWPENETEEARDEIEEKNTK 585
           +N   ++ GT++++P  P     E+   E  D  E+  T+
Sbjct: 199 LNGYAILRGTVEDLPSPPEKFIVEDHFPEDFDIYEDDATE 238


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -2

Query: 719 RDNPKINALYVM--TGTID-EVPKLPPLV--WPENETEEARDEIEEKNTKARRASGPKQP 555
           +D  K N ++ +  T  ++ E+ + PP+    PE E +E   E+ +K  K RRA   + P
Sbjct: 378 KDRKKGNGIFDVEETEAVEAEIQEAPPVENEQPEEEEKECTPEVVKKEKKKRRADKNQNP 437

Query: 554 DPYVMDES 531
              V +E+
Sbjct: 438 SATVEEEA 445


>Z75552-6|CAA99939.1|  332|Caenorhabditis elegans Hypothetical
           protein W04D2.2a protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 699 IYLWVIPISFDKFNFNFSSPNIRFFFIIVEFPVLY 803
           +YL ++ I F+K NF  S   I +   I++F + Y
Sbjct: 46  LYLPILSIIFEKDNFKMSCFKIMYLLGIIDFMITY 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,741,918
Number of Sequences: 27780
Number of extensions: 339353
Number of successful extensions: 912
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)