Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_F03
         (827 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043...    42   8e-04
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412...    41   0.001
10_07_0162 - 13713504-13714754,13716445-13716522                       34   0.16 
03_01_0474 + 3646724-3646789,3648952-3649067,3649547-3649595,364...    32   0.64 
02_01_0772 - 5755371-5756654,5757808-5757834                           30   2.0  

>06_03_1014 -
           26902971-26903085,26903182-26903270,26904302-26904380,
           26904488-26904585,26904848-26904952,26905031-26905117,
           26905218-26905412,26905890-26905996,26906559-26906754,
           26906865-26906966,26907100-26907171,26907404-26907505,
           26907638-26907675,26907769-26907880,26907972-26908028,
           26908122-26908177,26908283-26908409,26908856-26908910,
           26908919-26909049
          Length = 640

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = -1

Query: 827 YQLSSMKFKDPVKXGEPKIKADFDQLXEDMSAAFRNLED 711
           Y+L S KF+DP + GE  + A F +L +D++  FRNLED
Sbjct: 600 YRLVSQKFEDPAE-GEDVLVAKFQKLYDDLTTGFRNLED 637


>02_01_0561 +
           4120268-4120339,4121462-4121588,4121715-4121770,
           4121841-4121912,4122017-4122128,4122247-4122284,
           4122412-4122513,4122619-4122675,4122755-4122826,
           4122992-4123093,4123210-4123405,4123988-4124094,
           4124497-4124691,4124771-4124857,4124905-4124913,
           4125599-4125703,4126067-4126164,4126250-4126328,
           4126912-4127000,4127086-4127200
          Length = 629

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = -1

Query: 827 YQLSSMKFKDPVKXGEPKIKADFDQLXEDMSAAFRNLED 711
           Y+L S KF+DP + G+  + A F +L +D++A FRNLED
Sbjct: 589 YRLVSQKFEDPAE-GKEVLIAKFQKLYDDLTAGFRNLED 626


>10_07_0162 - 13713504-13714754,13716445-13716522
          Length = 442

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 352 YVQGSALPLRDGFRRVFFYRLKFNKWNR 435
           Y+ G   PLR   RRV FY  + NKW+R
Sbjct: 186 YLFGGKDPLRGSMRRVVFYNARTNKWHR 213


>03_01_0474 +
           3646724-3646789,3648952-3649067,3649547-3649595,
           3649641-3649697,3649743-3650993
          Length = 512

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 352 YVQGSALPLRDGFRRVFFYRLKFNKWNR 435
           Y+ G   P+R   RRV FY  + NKW R
Sbjct: 256 YLFGGKDPVRGSMRRVVFYNARINKWLR 283


>02_01_0772 - 5755371-5756654,5757808-5757834
          Length = 436

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 352 YVQGSALPLRDGFRRVFFYRLKFNKWNR 435
           Y+ G + P R   RRV FY  + N+W+R
Sbjct: 180 YLLGGSDPRRGPMRRVVFYSARSNRWHR 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,092,295
Number of Sequences: 37544
Number of extensions: 312140
Number of successful extensions: 502
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)