Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_F03
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    58   8e-09
CU457740-7|CAM36337.1|  363|Caenorhabditis elegans Hypothetical ...    30   2.3  
AL161712-7|CAC70132.1|  235|Caenorhabditis elegans Hypothetical ...    29   5.4  

>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = -1

Query: 827 YQLSSMKFKDPVKXGEPKIKADFDQLXEDMSAAFRNLED 711
           YQLS+MKFKDPV  GE KI+ D++ L E M+ AFRNLED
Sbjct: 568 YQLSAMKFKDPVADGEAKIRKDYEDLAEAMANAFRNLED 606


>CU457740-7|CAM36337.1|  363|Caenorhabditis elegans Hypothetical
           protein C50E10.7 protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 583 IIFATTHKISFGHSESLLFTLKLISVNFSVSITIIF*RQYSV*SSRLRK 729
           IIF TT+ I F   + +   + L+ +N S  I     RQYS+   RL K
Sbjct: 175 IIFTTTYLIFFNKLQFIPIIIFLVVINTSAMIGFFLNRQYSLKILRLFK 223


>AL161712-7|CAC70132.1|  235|Caenorhabditis elegans Hypothetical
           protein Y66D12A.10 protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +1

Query: 529 TLHSFVRN*SRCCDDKISIIFATTHKISFGHSESLLFTLKLISVNFSVSITII 687
           T HS+ R   +CCDD++ ++      IS  H          + V  SV++ +I
Sbjct: 93  TGHSYARIFGKCCDDRLRMVHVQDAYISAHHQLVNFVRFCELVVPLSVNLLVI 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,034,848
Number of Sequences: 27780
Number of extensions: 327489
Number of successful extensions: 739
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)