Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_E23
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0436 - 3166764-3166949,3167115-3167258,3167343-3167469,316... 97 1e-20
04_04_1528 + 34172149-34172233,34172335-34172414,34172621-341726... 88 8e-18
06_03_1194 + 28305388-28305472,28305603-28305682,28305771-283058... 87 1e-17
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 66 4e-11
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 59 3e-09
11_06_0025 - 19341127-19341339,19341426-19341620,19341912-193420... 34 0.15
03_06_0394 + 33592780-33593310,33593890-33594013,33594233-335943... 33 0.19
01_07_0216 - 42071041-42071496 32 0.59
08_01_0007 - 57681-57728,58260-58336,58418-58464,58808-58908,590... 29 3.1
06_02_0311 + 14175171-14175368,14175399-14175487,14175597-14175696 29 3.1
04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876... 29 4.1
04_04_0347 + 24564589-24565296 29 4.1
12_01_0778 + 7111562-7112152,7113034-7113157,7113252-7113395,711... 29 5.5
10_08_0131 - 15078894-15079617,15079898-15080016 29 5.5
01_07_0217 + 42072475-42072915 29 5.5
01_06_0942 - 33201095-33201430 29 5.5
12_01_0913 + 8882193-8883510,8887633-8887865,8889619-8889871,889... 28 7.2
08_02_1115 + 24394944-24396628,24397347-24397386,24397970-243980... 28 7.2
07_03_0588 - 19715677-19715754,19715843-19715942,19716170-197162... 28 7.2
04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738 28 7.2
02_05_1143 - 34406425-34406489,34406622-34406701,34406948-344071... 28 7.2
02_04_0593 + 24177897-24178182,24178442-24178509,24178617-241788... 28 7.2
09_04_0729 + 19780154-19780339,19780952-19781053,19781200-19781313 28 9.6
06_01_1179 + 10137652-10138038 28 9.6
05_06_0177 + 26164873-26165113,26165416-26165762 28 9.6
>02_01_0436 -
3166764-3166949,3167115-3167258,3167343-3167469,
3167746-3167825,3167933-3168184,3168271-3168399,
3169039-3169088,3169221-3169323,3169429-3169548,
3169725-3169786,3169873-3169915,3169995-3170183,
3170299-3170367,3170460-3170539,3170648-3170723
Length = 569
Score = 97.5 bits (232), Expect = 1e-20
Identities = 42/90 (46%), Positives = 60/90 (66%)
Frame = -3
Query: 771 KVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQETLA 592
K+HAYI+ L+KEMP+M GK ++ I NLG + K+QRE + GDFPD++ +E L
Sbjct: 472 KIHAYIIGHLKKEMPAMMGKAKAQQRLIDNLGDEFAKVQREYHLPAGDFPDVEHFKEVLG 531
Query: 591 NHDFTKFHPLKPKLLEVVDHMLATDIARLM 502
++ KF +KPKL++ VD MLA DI L+
Sbjct: 532 GYNIDKFEKMKPKLVQAVDDMLAYDIPELL 561
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = -3
Query: 354 CSKEKPN-YDRIFQSLNPI-DGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDE 181
CSKE Y F +P DG+VTGA A S L + L ++W ++D + GFL
Sbjct: 8 CSKEHHKIYAGWFAVADPDGDGRVTGADATKFFAMSGLSRADLKQVWAIADTKRQGFLGF 67
Query: 180 EEFALAMHLISVKVDGHDL 124
EF AM L+S+ G ++
Sbjct: 68 GEFVAAMQLVSLAQAGEEI 86
>04_04_1528 +
34172149-34172233,34172335-34172414,34172621-34172689,
34172780-34172837,34173296-34173357,34173441-34173554,
34173862-34173964,34174085-34174134,34174335-34174724,
34174918-34175244,34175360-34175689
Length = 555
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/90 (43%), Positives = 62/90 (68%)
Frame = -3
Query: 771 KVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQETLA 592
KVHA+I++ L+KEMP++ GK ++ + L + + K+Q+E + GDFP + + +ETL+
Sbjct: 458 KVHAHIISHLKKEMPALMGKAKAQQRLLDTLDEQFAKVQKELHLPAGDFPSVDEYRETLS 517
Query: 591 NHDFTKFHPLKPKLLEVVDHMLATDIARLM 502
++F KF LKPKL++ VD MLA DI L+
Sbjct: 518 AYNFDKFERLKPKLVQGVDDMLAYDIPDLL 547
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -3
Query: 363 EWICSKEKPNYDRIFQSLNPI-DGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFL 187
+W +++ Y R F + DG+VTG A S L L ++W ++D + G+L
Sbjct: 9 KWGLREQREAYLRWFSLADDDGDGRVTGKDALKFFAMSNLSRPELKQVWAIADSKRQGYL 68
Query: 186 DEEEFALAMHLISVKVDGHDLPTELPSHLV 97
EF AM L+S+ G+++ + +H V
Sbjct: 69 GFSEFMTAMQLVSLAQAGNEISQDTLAHAV 98
>06_03_1194 +
28305388-28305472,28305603-28305682,28305771-28305839,
28305936-28305993,28306082-28306134,28306229-28306271,
28306360-28306421,28306914-28307027,28307183-28307285,
28307377-28307426,28308138-28308266,28308340-28308591,
28308684-28308763,28309040-28309166,28309247-28309390,
28309849-28310034
Length = 544
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/90 (41%), Positives = 57/90 (63%)
Frame = -3
Query: 771 KVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQETLA 592
K+HA+I+ L+KEMP+M GK ++ I NL + K+QREQ + GDFP ++ ++ L
Sbjct: 447 KIHAHIIGHLKKEMPAMMGKAKAQQRLIDNLENEFAKVQREQHLPAGDFPYVEHFRDVLG 506
Query: 591 NHDFTKFHPLKPKLLEVVDHMLATDIARLM 502
+ KF +KPK+++ VD ML DI L+
Sbjct: 507 GYSIDKFEKIKPKMVQAVDDMLGYDIPELL 536
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = -3
Query: 300 DGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDL 124
DG++TG A SKLP + L ++W ++D + G+L EF AM L+S+ G ++
Sbjct: 31 DGRITGPDAIKFFAMSKLPRADLKQVWAIADSKRQGYLGFSEFVTAMQLVSLAQAGDEI 89
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 65.7 bits (153), Expect = 4e-11
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Frame = -3
Query: 390 GVDAG--HGDPEW--ICSKEKPNYDRIFQSLN-PIDGKVTGAAAKTEMVKSKLPNSVLGK 226
GV AG + +W + + Y ++F ++ DGK+TGA A+T + +LP +L +
Sbjct: 417 GVSAGVSNSASQWPKVTQSDIQKYTKVFADVDRDRDGKITGAEARTLFLSWRLPREILKQ 476
Query: 225 IWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHL 100
+W LSD D DG L EF +A++L+ G LP LP L
Sbjct: 477 VWDLSDQDNDGMLSLREFCIALYLMERHRAGTPLPPALPDSL 518
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 300 DGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDL- 124
DG+++G A + LP VL ++W +D +K GFL EF A+ L++V G L
Sbjct: 19 DGRISGQEAVAFFQGANLPQQVLAQVWMHADKNKTGFLGRPEFFNALRLVTVAQSGRQLT 78
Query: 123 PTELPSHLVPPS 88
P + S L P+
Sbjct: 79 PDIVQSALYGPA 90
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 59.3 bits (137), Expect = 3e-09
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Frame = -3
Query: 477 NIVSEPLIKGGAFEGVEDQVSPFGYGRGEGVDAGHGDPE--W--ICSKEKPNYDRIFQSL 310
++ S+P K F + +P G G + + + W I + Y +F +
Sbjct: 332 SLPSQPAPKQNQFNSMPSAPAPMGSFPGGQIPSNTNQSQAPWPKITQADVRKYMIVFIKV 391
Query: 309 N-PIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDG 133
+ DGK+TG A+ + +LP +L K+W LSD DKDG L EF A++L+ +
Sbjct: 392 DRDRDGKITGEEARNLFLSWRLPRELLRKVWDLSDQDKDGMLSFREFCTAVYLMERHREQ 451
Query: 132 HDLPTELP 109
LP LP
Sbjct: 452 RPLPDVLP 459
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = -3
Query: 300 DGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLP 121
DG+++G A S LP VL +IW +D ++ GFL E+F A+ L++V G +L
Sbjct: 17 DGRISGQEAVAFFKASALPQPVLAQIWTYADKNRTGFLGREDFYNALRLVTVAQSGRELT 76
Query: 120 TEL 112
++
Sbjct: 77 PDI 79
>11_06_0025 -
19341127-19341339,19341426-19341620,19341912-19342088,
19342505-19342672,19343533-19343574,19344129-19344214,
19345218-19345545
Length = 402
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 362 SGSPWPASTPSPRP*PNGETWSSTPSKAP--PFIRGSLTMLMSSC 490
+ +PWP S P PR T S P+ AP P GS T L SC
Sbjct: 65 TAAPWPPSPPPPRTPSAASTSSCRPTVAPAVPLPPGSQTSLHLSC 109
>03_06_0394 +
33592780-33593310,33593890-33594013,33594233-33594376,
33594463-33594615,33594973-33595088,33595253-33595420,
33595514-33595744,33596229-33596378
Length = 538
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -3
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEF-ALAMHLISVKVDGH 130
+++P+S L + +DIDK+G LD +EF A+++H+ + D H
Sbjct: 399 NQMPDSDLKILMDAADIDKNGILDYQEFVAVSIHVRKIGNDEH 441
>01_07_0216 - 42071041-42071496
Length = 151
Score = 31.9 bits (69), Expect = 0.59
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = -3
Query: 333 YDRIFQSLNPI-DGKVTGAAAKTEMVKSKL----PNSVLGKIWKLSDIDKDGFLDEEEF 172
+ R+F S + DGK++ + VK+ L P+ + + L+D D DG LDEEEF
Sbjct: 7 FRRVFGSFDQDGDGKISATELRL-CVKASLGEDMPDEEVQALMALADTDGDGLLDEEEF 64
>08_01_0007 -
57681-57728,58260-58336,58418-58464,58808-58908,
59016-59108,59418-59540,59637-59755,60154-60510,
60888-61011
Length = 362
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 359 HSGSPWPASTPSPRP*PNG-ETWSSTPS 439
H+ +P P TP+P P P G WS++ S
Sbjct: 71 HNAAPHPCHTPTPTPTPRGFADWSASTS 98
>06_02_0311 + 14175171-14175368,14175399-14175487,14175597-14175696
Length = 128
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = -3
Query: 399 RGEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIW 220
RGE D W ++ P YDR+ +++ P+ + G E K K ++L ++
Sbjct: 18 RGEEDDDDEEALRWTALEKLPTYDRVRRAVLPVVDEGGGGGGGWEAGK-KERRALLERLV 76
Query: 219 KLSDIDKDGFL 187
++++ D + FL
Sbjct: 77 RVAEDDNERFL 87
>04_04_0419 +
25086456-25086768,25087302-25087369,25087458-25087681,
25087929-25088012,25088593-25088806,25089252-25089428,
25089526-25089645,25089865-25089991,25090104-25090130,
25090526-25091007
Length = 611
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 249 LPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLI 151
+P S +K+ D+D G +D+EEF M L+
Sbjct: 212 IPESSFSAAFKMFDVDHSGEIDKEEFKKVMALM 244
>04_04_0347 + 24564589-24565296
Length = 235
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 356 IHSGSPWPASTPSPRP*P-NGETWSSTPSKAP 448
+HS PWPA P+P P +G P+ AP
Sbjct: 128 VHSSWPWPAHAPAPAPAVIHGTNSHLAPAPAP 159
>12_01_0778 +
7111562-7112152,7113034-7113157,7113252-7113395,
7113485-7113630,7113716-7113838,7113922-7114089,
7114253-7114474,7114572-7114745
Length = 563
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = -3
Query: 330 DRIFQSLNPIDGKVTGAAAKTEMVKS------KLPNSVLGKIWKLSDIDKDGFLDEEEF- 172
D I + N +D K G E+ K + ++ + + + +DID +G LD +EF
Sbjct: 388 DAIRELFNMLDTKKKGHLTLEELRKGLQVIGHNIHDTDVDMLMEAADIDGNGILDCKEFV 447
Query: 171 ALAMHLISVKVDGH 130
+++HL ++ D H
Sbjct: 448 TVSIHLKKIRSDEH 461
>10_08_0131 - 15078894-15079617,15079898-15080016
Length = 280
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 210 DIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPS 88
++++ +L+++ FA+A H+I +P E PS +VPPS
Sbjct: 52 ELERSEYLNDDYFAIAAHVI--------IPKEKPSVVVPPS 84
>01_07_0217 + 42072475-42072915
Length = 146
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = -3
Query: 333 YDRIFQSLN-PIDGKVTGAAAKTEMVKSKLPNSVLGK----IWKLSDIDKDGFLDEEEFA 169
+ R+F + + DGK++ A + M K+ L + + + +D D DG LDEEEF
Sbjct: 8 FRRVFSAFDRDADGKISAAELRLCM-KAALGEDMSAEEAEALVSSADTDDDGLLDEEEFT 66
Query: 168 -LAMHL 154
LA+ L
Sbjct: 67 KLAVQL 72
>01_06_0942 - 33201095-33201430
Length = 111
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -3
Query: 312 LNPIDGKVTGAAAKTEMVK---SKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLIS 148
++P GK+T + K +L + L ++ + D+D DG LD+ EF + M +S
Sbjct: 40 MDPGAGKITFRSLKRNAAMLGLGELRDDELSEMMREGDLDGDGALDQMEFCVLMVRLS 97
>12_01_0913 +
8882193-8883510,8887633-8887865,8889619-8889871,
8891281-8891470,8891641-8891773,8891797-8891886
Length = 738
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 336 NYDRIFQSLNPIDGKVTGAAAKTEMVKSKL 247
NY R+++ + P + +TG+ + E+V KL
Sbjct: 511 NYGRVYKGILPAESTITGSRQENEIVAVKL 540
>08_02_1115 +
24394944-24396628,24397347-24397386,24397970-24398005,
24398541-24398574,24398823-24398896
Length = 622
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 241 VGQLRLHHLCLCGGASHFAVDRVQRLEDSVVVRFLLAADPFWVTVAGVHALASTVTKW*D 420
+G H C CGG + +R+ D + R ++ W TV G + A VTK D
Sbjct: 149 LGNALCHFYCCCGGGGGEGMADARRVFDEMPERDAVS----WNTVIGGYVRAGEVTKAVD 204
Query: 421 L 423
+
Sbjct: 205 M 205
>07_03_0588 -
19715677-19715754,19715843-19715942,19716170-19716297,
19716385-19716552,19716623-19716735,19716820-19716972,
19717082-19717225,19718710-19719427
Length = 533
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -3
Query: 297 GKVTGAAAKTEMVK--SKLPNSVLGKIWKLSDIDKDGFLDEEEFALA-MHLISVKVDGH 130
G +T K + K SKL + + ++ + +D+D +G +D EF A MH ++ D H
Sbjct: 403 GTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEH 461
>04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738
Length = 707
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 GGRHEV-RGQLGGQVVSVHLHRDEMHRERKLLFVQEAVLVDVGELPNLAE 234
GG+ V R LGG V++ + + E+ RK+ FVQE V++ PN+ +
Sbjct: 407 GGQGTVYRAVLGGIAVAIKMCK-EIDENRKMEFVQELVILCRVNHPNIVK 455
>02_05_1143 -
34406425-34406489,34406622-34406701,34406948-34407119,
34407829-34408057
Length = 181
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 583 LHQVSPLETQVARSSGPHAGNGHCTAHGYDSTGGHQHCQ*TSDKGWCLRRCRRPGL 416
LH+++ + + VA ++ +G G G D+ GH+H D C RC P +
Sbjct: 25 LHRINQIISSVAAAANSSSGVGDTYVPGTDAAVGHRH----GDSTGC-SRCPAPAI 75
>02_04_0593 +
24177897-24178182,24178442-24178509,24178617-24178840,
24179221-24179304,24180183-24180396,24181242-24181418,
24181507-24181626,24181854-24181998,24182055-24182065,
24182222-24182314
Length = 473
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 300 DGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLI 151
DG ++ A + +P S +K+ D+D G +D+EEF M L+
Sbjct: 186 DGLISFAEYIFFVTLLSIPESSFNIAFKMFDLDHSGEIDKEEFKKVMALM 235
>09_04_0729 + 19780154-19780339,19780952-19781053,19781200-19781313
Length = 133
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 153 ISVKVDGHDLPTELPSHLVPPSK 85
+ +++D H +P E+ HL+ PSK
Sbjct: 54 VQIELDEHAIPKEIALHLIGPSK 76
>06_01_1179 + 10137652-10138038
Length = 128
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 356 IHSGSPWPASTPSPRP*PNGETWSSTPSKAP 448
I + + PA +PSP+P + T ++TP+KAP
Sbjct: 19 ISAAAQAPAESPSPKP--SKSTAAATPAKAP 47
>05_06_0177 + 26164873-26165113,26165416-26165762
Length = 195
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +2
Query: 359 HSGSPWPASTPSPRP*PNGETWSSTPSKAPPFIRGSLTMLMSSCGIISMSRAMSVASMWS 538
H+ + A P+P P P +S PS+ P + T+ SC + +R M + + +
Sbjct: 23 HASGRYVAPAPAPVPVPPPPR-TSPPSRIQPVVVVQGTIYCKSCNLSGYNRYMDASPLPN 81
Query: 539 TTS 547
T+
Sbjct: 82 ATA 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,159,998
Number of Sequences: 37544
Number of extensions: 490885
Number of successful extensions: 2055
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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