Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_E23
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF357878-1|AAK27716.1| 589|Caenorhabditis elegans receptor-medi... 315 3e-86
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 315 3e-86
AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor med... 315 3e-86
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 315 3e-86
AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor med... 315 3e-86
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 315 3e-86
AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor med... 315 3e-86
AF357876-1|AAK27714.1| 576|Caenorhabditis elegans receptor-medi... 307 5e-84
AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor med... 307 5e-84
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 90 2e-18
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 90 2e-18
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 90 2e-18
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 59 4e-09
AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical... 58 7e-09
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 31 1.2
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 29 2.8
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 29 3.7
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 29 3.7
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 29 3.7
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 29 3.7
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 29 4.9
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 28 6.5
Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical pr... 28 8.6
U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calciu... 28 8.6
>AF357878-1|AAK27716.1| 589|Caenorhabditis elegans receptor-mediated
endocytosis 1isoform I protein.
Length = 589
Score = 315 bits (773), Expect = 3e-86
Identities = 144/238 (60%), Positives = 186/238 (78%), Gaps = 6/238 (2%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 337 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 396
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 397 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 456
Query: 435 GVEDQVSPFGYGRGEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVK 256
+ +PFG+GRGEG D G + EW+ S+E+ D F+SL P++G ++G AAK MVK
Sbjct: 457 QTTEAETPFGFGRGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVK 516
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSKR 82
SKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PPSKR
Sbjct: 517 SKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPPSKR 574
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-mediated
endocytosis 1isoform II protein.
Length = 835
Score = 315 bits (773), Expect = 3e-86
Identities = 144/238 (60%), Positives = 186/238 (78%), Gaps = 6/238 (2%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 583 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 642
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 643 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 702
Query: 435 GVEDQVSPFGYGRGEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVK 256
+ +PFG+GRGEG D G + EW+ S+E+ D F+SL P++G ++G AAK MVK
Sbjct: 703 QTTEAETPFGFGRGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVK 762
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSKR 82
SKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PPSKR
Sbjct: 763 SKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPPSKR 820
>AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor mediated
endocytosis protein1, isoform f protein.
Length = 555
Score = 315 bits (773), Expect = 3e-86
Identities = 144/238 (60%), Positives = 186/238 (78%), Gaps = 6/238 (2%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 303 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 362
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 363 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 422
Query: 435 GVEDQVSPFGYGRGEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVK 256
+ +PFG+GRGEG D G + EW+ S+E+ D F+SL P++G ++G AAK MVK
Sbjct: 423 QTTEAETPFGFGRGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVK 482
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSKR 82
SKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PPSKR
Sbjct: 483 SKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPPSKR 540
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor mediated
endocytosis protein1, isoform a protein.
Length = 786
Score = 315 bits (773), Expect = 3e-86
Identities = 144/238 (60%), Positives = 186/238 (78%), Gaps = 6/238 (2%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 534 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 593
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 594 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 653
Query: 435 GVEDQVSPFGYGRGEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVK 256
+ +PFG+GRGEG D G + EW+ S+E+ D F+SL P++G ++G AAK MVK
Sbjct: 654 QTTEAETPFGFGRGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVK 713
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSKR 82
SKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PPSKR
Sbjct: 714 SKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPPSKR 771
>AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor mediated
endocytosis protein1, isoform e protein.
Length = 613
Score = 315 bits (773), Expect = 3e-86
Identities = 144/238 (60%), Positives = 186/238 (78%), Gaps = 6/238 (2%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 361 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 420
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 421 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 480
Query: 435 GVEDQVSPFGYGRGEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVK 256
+ +PFG+GRGEG D G + EW+ S+E+ D F+SL P++G ++G AAK MVK
Sbjct: 481 QTTEAETPFGFGRGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVK 540
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSKR 82
SKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PPSKR
Sbjct: 541 SKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPPSKR 598
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor mediated
endocytosis protein1, isoform b protein.
Length = 835
Score = 315 bits (773), Expect = 3e-86
Identities = 144/238 (60%), Positives = 186/238 (78%), Gaps = 6/238 (2%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 583 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 642
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 643 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 702
Query: 435 GVEDQVSPFGYGRGEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVK 256
+ +PFG+GRGEG D G + EW+ S+E+ D F+SL P++G ++G AAK MVK
Sbjct: 703 QTTEAETPFGFGRGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVK 762
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSKR 82
SKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PPSKR
Sbjct: 763 SKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPPSKR 820
>AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor mediated
endocytosis protein1, isoform c protein.
Length = 589
Score = 315 bits (773), Expect = 3e-86
Identities = 144/238 (60%), Positives = 186/238 (78%), Gaps = 6/238 (2%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 337 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 396
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 397 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 456
Query: 435 GVEDQVSPFGYGRGEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVK 256
+ +PFG+GRGEG D G + EW+ S+E+ D F+SL P++G ++G AAK MVK
Sbjct: 457 QTTEAETPFGFGRGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVK 516
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSKR 82
SKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PPSKR
Sbjct: 517 SKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPPSKR 574
>AF357876-1|AAK27714.1| 576|Caenorhabditis elegans receptor-mediated
endocytosis 1isoform IV protein.
Length = 576
Score = 307 bits (754), Expect = 5e-84
Identities = 144/243 (59%), Positives = 186/243 (76%), Gaps = 11/243 (4%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 319 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 378
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 379 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 438
Query: 435 GVEDQVSPFGYGR-----GEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAK 271
+ +PFG+GR GEG D G + EW+ S+E+ D F+SL P++G ++G AAK
Sbjct: 439 QTTEAETPFGFGRYDARWGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAK 498
Query: 270 TEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPP 91
MVKSKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PP
Sbjct: 499 EHMVKSKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPP 558
Query: 90 SKR 82
SKR
Sbjct: 559 SKR 561
>AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor mediated
endocytosis protein1, isoform d protein.
Length = 576
Score = 307 bits (754), Expect = 5e-84
Identities = 144/243 (59%), Positives = 186/243 (76%), Gaps = 11/243 (4%)
Frame = -3
Query: 777 LXKVHAYIVNELRKEMPSMFGKDSKKKDXIKNLGQVYDKIQREQQISPGDFPDIKKMQET 598
L KVHAYI+ ELRK+MPSM GKD KKKD I+NL ++Y+++QRE ISPGDFPD+ KM+E
Sbjct: 319 LAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREK 378
Query: 597 LANHDFTKFHPLKPKLLEVVDHMLATDIARLMDMIPQEDI------NIVSEPLIKGGAFE 436
L DF+KF+PLKPKLLEVVD MLATDIARLM IP+E+ N ++P ++GGAF
Sbjct: 379 LQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFS 438
Query: 435 GVEDQVSPFGYGR-----GEGVDAGHGDPEWICSKEKPNYDRIFQSLNPIDGKVTGAAAK 271
+ +PFG+GR GEG D G + EW+ S+E+ D F+SL P++G ++G AAK
Sbjct: 439 QTTEAETPFGFGRYDARWGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAK 498
Query: 270 TEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPP 91
MVKSKLPNSVLGK+WKL+DIDKDG LD +EFALA +LI++K++GH++P+ELP HL+PP
Sbjct: 499 EHMVKSKLPNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHEIPSELPKHLIPP 558
Query: 90 SKR 82
SKR
Sbjct: 559 SKR 561
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = -3
Query: 366 PEW-ICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGF 190
P+W I ++ YD IFQSLNP++GK++GA + ++ S L L +IW+LSD DKDG
Sbjct: 109 PQWPITPTDQAKYDSIFQSLNPVNGKLSGAHVRPVLMNSGLDAHALARIWELSDQDKDGN 168
Query: 189 LDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSK 85
LD E ++A+HL+ + +P +LP +L+ PSK
Sbjct: 169 LDRIEMSVALHLVYRSLQSDPVPAQLPPNLIHPSK 203
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = -3
Query: 330 DRIFQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLI 151
D+ Q+ DG V G + M+ + L +L +W L+DI K G L+ E+FAL MHL+
Sbjct: 300 DQFAQTDTNKDGLVDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALTMHLL 359
Query: 150 SVKVDGHDLPTELPSHLVPPSKR 82
+ G +P+ELP HL+PPS R
Sbjct: 360 DMAKRGESIPSELPLHLIPPSFR 382
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 237 VLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTE--LPSHLVPP 91
VLG+IW+LSD K G LD+ +A L++ G + S L PP
Sbjct: 3 VLGQIWELSDSQKVGSLDKRGAFVAFKLVAAAQQGKPVANSSLYDSSLQPP 53
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = -3
Query: 366 PEW-ICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGF 190
P+W I ++ YD IFQSLNP++GK++GA + ++ S L L +IW+LSD DKDG
Sbjct: 109 PQWPITPTDQAKYDSIFQSLNPVNGKLSGAHVRPVLMNSGLDAHALARIWELSDQDKDGN 168
Query: 189 LDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSK 85
LD E ++A+HL+ + +P +LP +L+ PSK
Sbjct: 169 LDRIEMSVALHLVYRSLQSDPVPAQLPPNLIHPSK 203
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = -3
Query: 330 DRIFQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLI 151
D+ Q+ DG V G + M+ + L +L +W L+DI K G L+ E+FAL MHL+
Sbjct: 300 DQFAQTDTNKDGLVDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALTMHLL 359
Query: 150 SVKVDGHDLPTELPSHLVPPSKR 82
+ G +P+ELP HL+PPS R
Sbjct: 360 DMAKRGESIPSELPLHLIPPSFR 382
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 237 VLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTE--LPSHLVPP 91
VLG+IW+LSD K G LD+ +A L++ G + S L PP
Sbjct: 3 VLGQIWELSDSQKVGSLDKRGAFVAFKLVAAAQQGKPVANSSLYDSSLQPP 53
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = -3
Query: 366 PEW-ICSKEKPNYDRIFQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGF 190
P+W I ++ YD IFQSLNP++GK++GA + ++ S L L +IW+LSD DKDG
Sbjct: 154 PQWPITPTDQAKYDSIFQSLNPVNGKLSGAHVRPVLMNSGLDAHALARIWELSDQDKDGN 213
Query: 189 LDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSK 85
LD E ++A+HL+ + +P +LP +L+ PSK
Sbjct: 214 LDRIEMSVALHLVYRSLQSDPVPAQLPPNLIHPSK 248
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = -3
Query: 330 DRIFQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLI 151
D+ Q+ DG V G + M+ + L +L +W L+DI K G L+ E+FAL MHL+
Sbjct: 345 DQFAQTDTNKDGLVDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALTMHLL 404
Query: 150 SVKVDGHDLPTELPSHLVPPSKR 82
+ G +P+ELP HL+PPS R
Sbjct: 405 DMAKRGESIPSELPLHLIPPSFR 427
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = -3
Query: 333 YDRIFQSLNPIDGKVTGAA-AKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMH 157
++ F +NP GAA A T + KS L VLG+IW+LSD K G LD+ +A
Sbjct: 15 FNHAFAEMNPHGAPRIGAAEAATFLKKSNLAMPVLGQIWELSDSQKVGSLDKRGAFVAFK 74
Query: 156 LISVKVDGHDLPTE--LPSHLVPP 91
L++ G + S L PP
Sbjct: 75 LVAAAQQGKPVANSSLYDSSLQPP 98
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -3
Query: 276 AKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLV 97
A+ +++S LP VL +IW LSD+DKDG LD E+++AM L + G +P +LP L+
Sbjct: 34 ARNALMRSNLPTQVLSQIWALSDLDKDGRLDIREYSIAMRLALNCLAGIPIPPQLPPSLL 93
Query: 96 PPSKRN 79
RN
Sbjct: 94 VVPARN 99
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = -3
Query: 342 KPNYDRIFQSLNPID-GKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFAL 166
K Y ++F +L+ G ++ ++ + S LP +VL IW LSD++KDG L +E+A+
Sbjct: 177 KLKYSQLFNALDKERLGSLSSQVGRSALGLSGLPTNVLAHIWFLSDVNKDGKLSVDEYAI 236
Query: 165 AMHLISVKVDGHDLPTELPSHLV 97
+ ++I + G LP P LV
Sbjct: 237 SQYMIEMFKSGFALPKITPLELV 259
>AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical
protein Y39B6A.38 protein.
Length = 410
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = -3
Query: 258 KSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVKVDGH-DLPTELPSHLVPP 91
+S L S L KIW L+D+++DG+LD EF++AMHL+ +KV G +P LP PP
Sbjct: 88 RSSLDMSSLSKIWSLADVNEDGWLDLNEFSIAMHLVVLKVKGEVPIPDVLPGFARPP 144
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 321 FQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVK 142
F N DG + G KTE NS++G I + + D +D + A + I +
Sbjct: 728 FGITNKTDGDLLGVELKTEEGLDVKGNSIIGDIPSGARVSVDLLVDFGDSATSREWILTR 787
Query: 141 VDGHD 127
DGH+
Sbjct: 788 DDGHE 792
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 321 FQSLNPIDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLISVK 142
F N DG + G KTE NS++G I + + D +D + A + I +
Sbjct: 738 FGITNKTDGDLLGVELKTEEGLDVKGNSIIGDIPSGARVSVDLLVDFGDSATSREWILTR 797
Query: 141 VDGHD 127
DGH+
Sbjct: 798 DDGHE 802
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 368 SPWPASTPSPRP*PNGETWSSTPSKAP 448
+P P+ TP PR G+ SS PSK P
Sbjct: 419 TPSPSETPKPRAQDAGKARSSVPSKIP 445
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 686 RILVRFMIKYKESSKYHRETFQI 618
RIL+ +M++ ES K HRETF +
Sbjct: 260 RILIDWMMEVCESEKLHRETFHL 282
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 686 RILVRFMIKYKESSKYHRETFQI 618
RIL+ +M++ ES K HRETF +
Sbjct: 263 RILIDWMMEVCESEKLHRETFHL 285
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 686 RILVRFMIKYKESSKYHRETFQI 618
RIL+ +M++ ES K HRETF +
Sbjct: 263 RILIDWMMEVCESEKLHRETFHL 285
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 686 RILVRFMIKYKESSKYHRETFQI 618
RIL+ +M++ ES K HRETF +
Sbjct: 263 RILIDWMMEVCESEKLHRETFHL 285
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 255 SKLPNSVLGKIWKLSDIDKDGFLDEEEFAL 166
SK ++++ ++K D D+DGF+ +EEF L
Sbjct: 417 SKHISAMVDAVFKHYDHDRDGFISQEEFQL 446
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 574 VSPLETQVARSSGPHAGN-GHCTAHGYDSTGG 482
V PL+ + R G H G GH HG+ GG
Sbjct: 447 VDPLDPEAQRQGGGHHGGFGHGFPHGFHHFGG 478
>Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical
protein F02H6.1 protein.
Length = 537
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/43 (20%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -3
Query: 753 VNELRKEMPSMFGKDSKKKDXIKNLGQ-VYDKIQREQQISPGD 628
+ LR S F ++ +++D ++ +GQ ++++ +++Q+ + G+
Sbjct: 234 LENLRNFRDSQFAQEEQRRDRLREIGQRIFNRFEQQQEEAAGN 276
>U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 3 protein.
Length = 199
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -3
Query: 222 WKLSDIDKDGFLDEEEFALAMHLISVKVDGHDLPTELPSHLVPPSKR 82
+ L D+DKDGF+ ++E A + I + G+ L ELP P KR
Sbjct: 115 FSLYDVDKDGFITKDEMADIVDAIYSMI-GNML--ELPKDEDTPQKR 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,027,434
Number of Sequences: 27780
Number of extensions: 373575
Number of successful extensions: 1378
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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