Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E22
         (569 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04627-1|AAA56664.1|  763|Homo sapiens 78 kDa gastrin-binding pr...    91   2e-18
BC009235-1|AAH09235.1|  763|Homo sapiens hydroxyacyl-Coenzyme A ...    91   2e-18
AC011742-2|AAX93141.1|  537|Homo sapiens unknown protein.              91   2e-18
D16480-1|BAA03941.1|  763|Homo sapiens enoyl-CoA hydratase/3-hyd...    89   1e-17
U04628-1|AAA69021.1|  112|Homo sapiens GBP protein.                    75   1e-13
BC029049-1|AAH29049.1|  405|Homo sapiens family with sequence si...    30   6.6  
BC004298-1|AAH04298.1|  294|Homo sapiens PLEKHG3 protein protein.      29   8.7  

>U04627-1|AAA56664.1|  763|Homo sapiens 78 kDa gastrin-binding
           protein protein.
          Length = 763

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = -3

Query: 519 EDQQLRMVSRFVNEAVLSLEEKILHNPLEGDVGAVXXXXXXXXXXXXFRWVDQYGADKLV 340
           ED Q R+V+RFVNEAV+ L+E IL  P EGD+GAV            FR+VD YGA K+V
Sbjct: 671 EDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIV 730

Query: 339 KKMEEYQGLYGAPFKPAQTLVDMAKDTSKKFYE 241
            ++++Y+  YG  F P Q L D A   +KKFY+
Sbjct: 731 DRLKKYEAAYGKQFTPCQLLADHANSPNKKFYQ 763


>BC009235-1|AAH09235.1|  763|Homo sapiens hydroxyacyl-Coenzyme A
           dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
           protein.
          Length = 763

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = -3

Query: 519 EDQQLRMVSRFVNEAVLSLEEKILHNPLEGDVGAVXXXXXXXXXXXXFRWVDQYGADKLV 340
           ED Q R+V+RFVNEAV+ L+E IL  P EGD+GAV            FR+VD YGA K+V
Sbjct: 671 EDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIV 730

Query: 339 KKMEEYQGLYGAPFKPAQTLVDMAKDTSKKFYE 241
            ++++Y+  YG  F P Q L D A   +KKFY+
Sbjct: 731 DRLKKYEAAYGKQFTPCQLLADHANSPNKKFYQ 763


>AC011742-2|AAX93141.1|  537|Homo sapiens unknown protein.
          Length = 537

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = -3

Query: 519 EDQQLRMVSRFVNEAVLSLEEKILHNPLEGDVGAVXXXXXXXXXXXXFRWVDQYGADKLV 340
           ED Q R+V+RFVNEAV+ L+E IL  P EGD+GAV            FR+VD YGA K+V
Sbjct: 445 EDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIV 504

Query: 339 KKMEEYQGLYGAPFKPAQTLVDMAKDTSKKFYE 241
            ++++Y+  YG  F P Q L D A   +KKFY+
Sbjct: 505 DRLKKYEAAYGKQFTPCQLLADHANSPNKKFYQ 537


>D16480-1|BAA03941.1|  763|Homo sapiens enoyl-CoA
           hydratase/3-hydroxyacyl-CoA dehydrogenase alpha-subunit
           of trifunctio protein.
          Length = 763

 Score = 89.0 bits (211), Expect = 1e-17
 Identities = 44/93 (47%), Positives = 58/93 (62%)
 Frame = -3

Query: 519 EDQQLRMVSRFVNEAVLSLEEKILHNPLEGDVGAVXXXXXXXXXXXXFRWVDQYGADKLV 340
           ED Q R+V+RFVNEAV+ L+E I   P EGD+GAV            FR+VD YGA K+V
Sbjct: 671 EDIQFRLVTRFVNEAVMCLQEGISATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIV 730

Query: 339 KKMEEYQGLYGAPFKPAQTLVDMAKDTSKKFYE 241
            ++++Y+  YG  F P Q L D A   +KKFY+
Sbjct: 731 DRLKKYEAAYGKQFTPCQLLADHANSPNKKFYQ 763


>U04628-1|AAA69021.1|  112|Homo sapiens GBP protein.
          Length = 112

 Score = 75.4 bits (177), Expect = 1e-13
 Identities = 39/93 (41%), Positives = 54/93 (58%)
 Frame = -3

Query: 519 EDQQLRMVSRFVNEAVLSLEEKILHNPLEGDVGAVXXXXXXXXXXXXFRWVDQYGADKLV 340
           ED Q R+++RFVNEAV   +E IL  P EGD+GAV            F +VD Y A K+V
Sbjct: 20  EDIQFRLLTRFVNEAVTCPQEGILATPAEGDIGAVFGLSFPPCLGGPFCFVDLYEAQKIV 79

Query: 339 KKMEEYQGLYGAPFKPAQTLVDMAKDTSKKFYE 241
             +++Y+  YG  F P+Q L D     +KKF++
Sbjct: 80  DGLKKYEAAYGKEFTPSQLLADHTNSPNKKFHQ 112


>BC029049-1|AAH29049.1|  405|Homo sapiens family with sequence
           similarity 55, member A protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 349 ISAILIHPSERSTSKWREAETKDRTNITFKG 441
           +S +LIHPSE +++ WR A  +    I FKG
Sbjct: 36  LSLLLIHPSEGASALWR-ARNQGYDKIIFKG 65


>BC004298-1|AAH04298.1|  294|Homo sapiens PLEKHG3 protein protein.
          Length = 294

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +2

Query: 383 PPVNGGKPRPKTAPTSPSRGLCRIFSSNDNTASFTNLETIRSCW 514
           P VNG +P     P  P R  C+   S  +T     L+ I+S W
Sbjct: 239 PSVNGMEPPSPGCPVEPDRSSCKKKESALSTRDRLLLDKIKSWW 282


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,757,059
Number of Sequences: 237096
Number of extensions: 1697144
Number of successful extensions: 11522
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11517
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)