Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E22
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical ...    96   1e-20
AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical ...    96   1e-20
Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical pr...    83   1e-16
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    28   4.1  
Z81119-4|CAB03335.2|  389|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical
           protein T08B2.7b protein.
          Length = 755

 Score = 96.3 bits (229), Expect = 1e-20
 Identities = 54/109 (49%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
 Frame = -3

Query: 564 LKDKYALEPRGA-NTVEDQQLRMVSRFVNEAVLSLEEKILHNPLEGDVGAVXXXXXXXXX 388
           L  KY L P  + ++ ED+Q+R+VSRFVNEA+L LEE +L +P +GD+ +V         
Sbjct: 647 LLQKYKLTPNASVSSPEDRQIRLVSRFVNEALLCLEEGVLASPSDGDIASVFGVGFPPFW 706

Query: 387 XXXFRWVDQYGADKLVKKMEEYQGLYGA-PFKPAQTLVDMAKDTSKKFY 244
              FR+VD YGADKLVK ME++ G Y A  F+P Q L D AK + KKFY
Sbjct: 707 GGPFRFVDLYGADKLVKSMEKFAGAYEAVQFEPCQLLKDHAK-SGKKFY 754


>AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical
           protein T08B2.7a protein.
          Length = 781

 Score = 96.3 bits (229), Expect = 1e-20
 Identities = 54/109 (49%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
 Frame = -3

Query: 564 LKDKYALEPRGA-NTVEDQQLRMVSRFVNEAVLSLEEKILHNPLEGDVGAVXXXXXXXXX 388
           L  KY L P  + ++ ED+Q+R+VSRFVNEA+L LEE +L +P +GD+ +V         
Sbjct: 673 LLQKYKLTPNASVSSPEDRQIRLVSRFVNEALLCLEEGVLASPSDGDIASVFGVGFPPFW 732

Query: 387 XXXFRWVDQYGADKLVKKMEEYQGLYGA-PFKPAQTLVDMAKDTSKKFY 244
              FR+VD YGADKLVK ME++ G Y A  F+P Q L D AK + KKFY
Sbjct: 733 GGPFRFVDLYGADKLVKSMEKFAGAYEAVQFEPCQLLKDHAK-SGKKFY 780


>Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical
           protein C29F3.1 protein.
          Length = 755

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
 Frame = -3

Query: 564 LKDKYALEP-RGANTVEDQQLRMVSRFVNEAVLSLEEKILHNPLEGDVGAVXXXXXXXXX 388
           L +KY L P +  ++ ED+QLR+VSRFVNEA+L LEE ++ +P +GD+ +V         
Sbjct: 647 LFEKYKLTPIKSVSSPEDRQLRLVSRFVNEALLCLEEGVISSPSDGDIASVFGLGFPPFW 706

Query: 387 XXXFRWVDQYGADKLVKKMEEYQGLY-GAPFKPAQTLVDMAKDTSKKFY 244
              FR+VD YGA KLV  M+ + G+Y    F+P Q L + AK +  +FY
Sbjct: 707 GGPFRFVDLYGAGKLVAAMDRFAGVYESVQFEPCQLLRNHAK-SGGQFY 754


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 380  GPPVNGGKPRPKTAPTSPSRGL 445
            GPP+ GG P  +  P  P RG+
Sbjct: 1495 GPPMRGGPPMFRGGPPGPGRGM 1516


>Z81119-4|CAB03335.2|  389|Caenorhabditis elegans Hypothetical
           protein T10H4.5 protein.
          Length = 389

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -1

Query: 500 WFPDL*MKQCYHWKKKFYTTPLKVMLVRS 414
           W+PD+ +K CY++K+    T   +++ R+
Sbjct: 189 WYPDILIKSCYNYKEHLNHTYYVLVVSRA 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,723,693
Number of Sequences: 27780
Number of extensions: 268660
Number of successful extensions: 671
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)