Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E22
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.7  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   6.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.6  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   8.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.6  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 371 HLKGPPVNGGKPRPKTAPTSP 433
           H   PP    KP+ KT PTSP
Sbjct: 246 HATKPP----KPQTKTKPTSP 262


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
 Frame = +2

Query: 377  KGPPVNGGKP---RPKTAPT 427
            +GP  +GG+P   RP+  PT
Sbjct: 1355 RGPSASGGRPVPERPERVPT 1374


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 376 ERSTSKWREAETKDRTN 426
           ERS +K +  E++DR+N
Sbjct: 81  ERSKTKSKSPESRDRSN 97


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 351 DKLVKKMEEYQG 316
           DKL KK+EE+ G
Sbjct: 154 DKLKKKLEEWTG 165


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 351 DKLVKKMEEYQG 316
           DKL KK+EE+ G
Sbjct: 169 DKLKKKLEEWTG 180


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 351 DKLVKKMEEYQG 316
           DKL KK+EE+ G
Sbjct: 57  DKLKKKLEEWTG 68


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 395 GGKPRPKTAPTSPSRG 442
           G +P P  +P +P RG
Sbjct: 22  GPQPSPHQSPQAPQRG 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,717
Number of Sequences: 438
Number of extensions: 3225
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)