Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E21
         (662 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019272-1|AAH19272.1|  142|Homo sapiens thioredoxin-like 4A pro...   305   8e-83
BC001046-1|AAH01046.1|  142|Homo sapiens thioredoxin-like 4A pro...   305   8e-83
AF146373-1|AAF17332.1|  142|Homo sapiens thioredoxin-like U5 snR...   305   8e-83
AF023611-1|AAB81950.1|  142|Homo sapiens Dim1p homolog protein.       305   8e-83
AF023612-1|AAB81951.1|   91|Homo sapiens Dim1p homolog protein.       187   4e-47
CR457240-1|CAG33521.1|  149|Homo sapiens FLJ20511 protein.            113   7e-25
BC009646-1|AAH09646.1|  149|Homo sapiens thioredoxin-like 4B pro...   113   7e-25
AY566808-1|AAS68520.1|  149|Homo sapiens Dim1-like protein protein.   113   7e-25
AK000518-1|BAA91224.1|  149|Homo sapiens protein ( Homo sapiens ...   113   7e-25
AK222889-1|BAD96609.1|  149|Homo sapiens thioredoxin-like 4B var...   111   3e-24

>BC019272-1|AAH19272.1|  142|Homo sapiens thioredoxin-like 4A
           protein.
          Length = 142

 Score =  305 bits (749), Expect = 8e-83
 Identities = 138/142 (97%), Positives = 140/142 (98%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 437 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVY 258
           VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINW +EDKQEM+DIIETVY
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120

Query: 257 RGARKGRGLVVSPKDYSTKYRY 192
           RGARKGRGLVVSPKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142


>BC001046-1|AAH01046.1|  142|Homo sapiens thioredoxin-like 4A
           protein.
          Length = 142

 Score =  305 bits (749), Expect = 8e-83
 Identities = 138/142 (97%), Positives = 140/142 (98%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 437 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVY 258
           VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINW +EDKQEM+DIIETVY
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120

Query: 257 RGARKGRGLVVSPKDYSTKYRY 192
           RGARKGRGLVVSPKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142


>AF146373-1|AAF17332.1|  142|Homo sapiens thioredoxin-like U5 snRNP
           protein U5-15kD protein.
          Length = 142

 Score =  305 bits (749), Expect = 8e-83
 Identities = 138/142 (97%), Positives = 140/142 (98%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 437 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVY 258
           VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINW +EDKQEM+DIIETVY
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120

Query: 257 RGARKGRGLVVSPKDYSTKYRY 192
           RGARKGRGLVVSPKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142


>AF023611-1|AAB81950.1|  142|Homo sapiens Dim1p homolog protein.
          Length = 142

 Score =  305 bits (749), Expect = 8e-83
 Identities = 138/142 (97%), Positives = 140/142 (98%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 437 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVY 258
           VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINW +EDKQEM+DIIETVY
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120

Query: 257 RGARKGRGLVVSPKDYSTKYRY 192
           RGARKGRGLVVSPKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142


>AF023612-1|AAB81951.1|   91|Homo sapiens Dim1p homolog protein.
          Length = 91

 Score =  187 bits (455), Expect = 4e-47
 Identities = 84/85 (98%), Positives = 84/85 (98%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 437 VDITEVPDFNKMYELYDPCTVMFFF 363
           VDITEVPDFNKMYELYDPCTVMFFF
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFF 85


>CR457240-1|CAG33521.1|  149|Homo sapiens FLJ20511 protein.
          Length = 149

 Score =  113 bits (271), Expect = 7e-25
 Identities = 53/136 (38%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MS++L  L +  +VDQAI S  ++V+V+RFG D DP C+++D++L   +  +   A IYL
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60

Query: 437 VDITEVPDFNKMYEL-YDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETV 261
           VD+ +   + + +++ Y P TV FFF  +H+ +D G+ ++ K     + KQ+ ID+IE +
Sbjct: 61  VDVDQTAVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119

Query: 260 YRGARKGRGLVVSPKD 213
           YRGA +G+ +V SP D
Sbjct: 120 YRGAMRGKLIVQSPID 135


>BC009646-1|AAH09646.1|  149|Homo sapiens thioredoxin-like 4B
           protein.
          Length = 149

 Score =  113 bits (271), Expect = 7e-25
 Identities = 53/136 (38%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MS++L  L +  +VDQAI S  ++V+V+RFG D DP C+++D++L   +  +   A IYL
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60

Query: 437 VDITEVPDFNKMYEL-YDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETV 261
           VD+ +   + + +++ Y P TV FFF  +H+ +D G+ ++ K     + KQ+ ID+IE +
Sbjct: 61  VDVDQTAVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119

Query: 260 YRGARKGRGLVVSPKD 213
           YRGA +G+ +V SP D
Sbjct: 120 YRGAMRGKLIVQSPID 135


>AY566808-1|AAS68520.1|  149|Homo sapiens Dim1-like protein protein.
          Length = 149

 Score =  113 bits (271), Expect = 7e-25
 Identities = 53/136 (38%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MS++L  L +  +VDQAI S  ++V+V+RFG D DP C+++D++L   +  +   A IYL
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60

Query: 437 VDITEVPDFNKMYEL-YDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETV 261
           VD+ +   + + +++ Y P TV FFF  +H+ +D G+ ++ K     + KQ+ ID+IE +
Sbjct: 61  VDVDQTAVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119

Query: 260 YRGARKGRGLVVSPKD 213
           YRGA +G+ +V SP D
Sbjct: 120 YRGAMRGKLIVQSPID 135


>AK000518-1|BAA91224.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20511 fis, clone KAT09708. ).
          Length = 149

 Score =  113 bits (271), Expect = 7e-25
 Identities = 53/136 (38%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MS++L  L +  +VDQAI S  ++V+V+RFG D DP C+++D++L   +  +   A IYL
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60

Query: 437 VDITEVPDFNKMYEL-YDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETV 261
           VD+ +   + + +++ Y P TV FFF  +H+ +D G+ ++ K     + KQ+ ID+IE +
Sbjct: 61  VDVDQTAVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119

Query: 260 YRGARKGRGLVVSPKD 213
           YRGA +G+ +V SP D
Sbjct: 120 YRGAMRGKLIVQSPID 135


>AK222889-1|BAD96609.1|  149|Homo sapiens thioredoxin-like 4B
           variant protein.
          Length = 149

 Score =  111 bits (266), Expect = 3e-24
 Identities = 52/136 (38%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
 Frame = -1

Query: 617 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 438
           MS++L  L +  +VDQAI S  ++V+V+RFG D DP C+++D++L   +  +   A I+L
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIHL 60

Query: 437 VDITEVPDFNKMYEL-YDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETV 261
           VD+ +   + + +++ Y P TV FFF  +H+ +D G+ ++ K     + KQ+ ID+IE +
Sbjct: 61  VDVDQTAVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119

Query: 260 YRGARKGRGLVVSPKD 213
           YRGA +G+ +V SP D
Sbjct: 120 YRGAMRGKLIVQSPID 135


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,542,380
Number of Sequences: 237096
Number of extensions: 1939059
Number of successful extensions: 3223
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3212
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)