Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E17
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S57284-1|AAB25906.1|  437|Caenorhabditis elegans S-adenosylhomoc...   319   1e-87
M64306-1|AAA28062.1|  437|Caenorhabditis elegans S-adenosylhomoc...   319   1e-87
AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical ...   319   1e-87
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U41749-1|AAB52488.2|  248|Caenorhabditis elegans Dehydrogenases,...    29   4.9  
U28941-3|AAM98025.1|  799|Caenorhabditis elegans Temporarily ass...    28   8.5  
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass...    28   8.5  
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass...    28   8.5  

>S57284-1|AAB25906.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  319 bits (784), Expect = 1e-87
 Identities = 155/221 (70%), Positives = 175/221 (79%), Gaps = 4/221 (1%)
 Frame = -3

Query: 773 VCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEEAAEVGQIFVT 594
           V VVAGYGDVGKG A + K FG RVIVTEIDPINALQAAMEG++VTT+EEAA    I VT
Sbjct: 217 VAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEEAAPKANIIVT 276

Query: 593 TTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNA-KKVNIKQHVDRYELENGN 417
           TTG  DI+  +H   + +DAIVCN+GHFDCEIDV WL+ NA KK  IK  VDRY L+NG 
Sbjct: 277 TTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNTNATKKDTIKPQVDRYTLKNGR 336

Query: 416 HIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPIGVHTLPKKLD 246
           H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK  T   Y +G++ LPK LD
Sbjct: 337 HVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKLGLYVLPKTLD 396

Query: 245 EEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 123
           EEVA LHL  LGVKLTKL+ +QA Y+GV   GPYKPDHYRY
Sbjct: 397 EEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHYRY 437


>M64306-1|AAA28062.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  319 bits (784), Expect = 1e-87
 Identities = 155/221 (70%), Positives = 175/221 (79%), Gaps = 4/221 (1%)
 Frame = -3

Query: 773 VCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEEAAEVGQIFVT 594
           V VVAGYGDVGKG A + K FG RVIVTEIDPINALQAAMEG++VTT+EEAA    I VT
Sbjct: 217 VAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEEAAPKANIIVT 276

Query: 593 TTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNA-KKVNIKQHVDRYELENGN 417
           TTG  DI+  +H   + +DAIVCN+GHFDCEIDV WL+ NA KK  IK  VDRY L+NG 
Sbjct: 277 TTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNTNATKKDTIKPQVDRYTLKNGR 336

Query: 416 HIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPIGVHTLPKKLD 246
           H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK  T   Y +G++ LPK LD
Sbjct: 337 HVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKLGLYVLPKTLD 396

Query: 245 EEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 123
           EEVA LHL  LGVKLTKL+ +QA Y+GV   GPYKPDHYRY
Sbjct: 397 EEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHYRY 437


>AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical
           protein K02F2.2 protein.
          Length = 437

 Score =  319 bits (784), Expect = 1e-87
 Identities = 155/221 (70%), Positives = 175/221 (79%), Gaps = 4/221 (1%)
 Frame = -3

Query: 773 VCVVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAAMEGFQVTTMEEAAEVGQIFVT 594
           V VVAGYGDVGKG A + K FG RVIVTEIDPINALQAAMEG++VTT+EEAA    I VT
Sbjct: 217 VAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEEAAPKANIIVT 276

Query: 593 TTGNIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDNNA-KKVNIKQHVDRYELENGN 417
           TTG  DI+  +H   + +DAIVCN+GHFDCEIDV WL+ NA KK  IK  VDRY L+NG 
Sbjct: 277 TTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNTNATKKDTIKPQVDRYTLKNGR 336

Query: 416 HIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPIGVHTLPKKLD 246
           H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK  T   Y +G++ LPK LD
Sbjct: 337 HVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKLGLYVLPKTLD 396

Query: 245 EEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPDHYRY 123
           EEVA LHL  LGVKLTKL+ +QA Y+GV   GPYKPDHYRY
Sbjct: 397 EEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHYRY 437


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 320 LAQIELWTKADTYPIGVHTLPKKLDEEVAALHLDHLGVKL 201
           LA +E+  + D Y + +H   K +D   AAL + HLG+K+
Sbjct: 222 LAMLEVARRCDFYGVKLHAA-KDIDGNDAALSVMHLGIKV 260


>U41749-1|AAB52488.2|  248|Caenorhabditis elegans Dehydrogenases,
           short chain protein25 protein.
          Length = 248

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 767 VVAGYGDVGKGCAQAFKGFGGRVIVTEIDPINALQAA 657
           V  G   +GK  +Q     G RV+V ++D  NA   A
Sbjct: 12  VTGGASGIGKAISQTLAKHGARVVVADLDSGNAAATA 48


>U28941-3|AAM98025.1|  799|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 149, isoform d protein.
          Length = 799

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 251 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 153
           ++EE+ +LH    G    KLTPK   +   SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697


>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 149, isoform a protein.
          Length = 1091

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 251 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 153
           ++EE+ +LH    G    KLTPK   +   SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697


>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 149, isoform b protein.
          Length = 1107

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 251 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 153
           ++EE+ +LH    G    KLTPK   +   SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,681,638
Number of Sequences: 27780
Number of extensions: 347497
Number of successful extensions: 805
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)