Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E14
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    25   0.47 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.81 
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    24   1.4  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    24   1.4  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    24   1.4  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    23   2.5  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    23   2.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.7  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 426 KQFNNNTHYNPNVFVIYALRHRIKQNVLLLYFEFNF 319
           K  +NN +YN N +  Y   +    N   LY+  N+
Sbjct: 88  KTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINY 123


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 230 FNNNTHYNPNVFVILRINTSN*TLYILNLISI 135
           ++ NT  NPN F+++  N  N T+   N +SI
Sbjct: 324 WDTNTELNPNTFILVAEN--NTTMVFCNDLSI 353



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 420 FNNNTHYNPNVFVIYA 373
           ++ NT  NPN F++ A
Sbjct: 324 WDTNTELNPNTFILVA 339


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -3

Query: 248 NQLIKQFNNNTHYNPNVFVILRINTSN*TLYILNLISIFSVTVXL 114
           +++I   +NN +YN N +  L  N      Y +N I    + V +
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQIPIPVPI 123


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -3

Query: 248 NQLIKQFNNNTHYNPNVFVILRINTSN*TLYILNLISIFSVTVXL 114
           +++I   +NN +YN N +  L  N      Y +N I    + V +
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQIPIPVPI 123


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -3

Query: 248 NQLIKQFNNNTHYNPNVFVILRINTSN*TLYILNLISIFSVTVXL 114
           +++I   +NN +YN N +  L  N      Y +N I    + V +
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYIEQIPIPVPI 123


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 242 LIKQFNNNTHYN-PNVFVILRINTSN*TLYILNLISI 135
           LIK   +N H +  N+F I++      T YI+ +  I
Sbjct: 47  LIKDLFDNVHNHIQNIFKIIKSTNEKITRYIIRMFLI 83


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 242 LIKQFNNNTHYN-PNVFVILRINTSN*TLYILNLISI 135
           LIK   +N H +  N+F I++      T YI+ +  I
Sbjct: 30  LIKDLFDNVHNHIQNIFKIIKSTNEKITRYIIRMFLI 66


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 577 YLKRKRKALTSIGLASFXM 633
           YLKR  K LTSI + S  M
Sbjct: 321 YLKRGGKTLTSISVESNTM 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,937
Number of Sequences: 438
Number of extensions: 2838
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)