Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E10
         (367 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0195 + 1327071-1327187,1328060-1328203,1328340-1328431,132...    54   3e-08
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450...    35   0.017
03_05_1105 + 30438140-30438350,30438448-30438926                       33   0.052
04_04_1347 + 32803664-32803796,32803891-32804093,32804202-328043...    29   1.5  
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331...    27   3.4  
01_06_0827 + 32260313-32260525,32261862-32262716                       27   6.0  
01_05_0668 - 24147412-24147618,24148019-24148286,24149506-241497...    26   7.9  

>02_01_0195 +
           1327071-1327187,1328060-1328203,1328340-1328431,
           1329393-1329579,1329676-1329831,1329959-1330012
          Length = 249

 Score = 54.4 bits (125), Expect = 3e-08
 Identities = 20/56 (35%), Positives = 37/56 (66%)
 Frame = -1

Query: 316 YQAHLYLGLMLMCGFVLFDTXLIIEKRRMGSKDFVXHALELFIDFIGMFRRLVIIL 149
           +   +Y GL++  G++++DT  IIE+   G  D++ HAL LF DF+ +  R+++I+
Sbjct: 177 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRILVIM 232


>05_04_0254 -
           19444409-19444621,19444724-19444887,19444974-19445087,
           19446086-19446395
          Length = 266

 Score = 35.1 bits (77), Expect = 0.017
 Identities = 14/57 (24%), Positives = 34/57 (59%)
 Frame = -1

Query: 298 LGLMLMCGFVLFDTXLIIEKRRMGSKDFVXHALELFIDFIGMFRRLVIILTQKEEQN 128
           LG ++  GF+++DT  +I  +R    D++  ++EL++D + +F  ++ ++   +  N
Sbjct: 212 LGALVFSGFIIYDTENLI--KRHTYDDYIWASVELYLDILNLFLYILNMIRSMQSDN 266


>03_05_1105 + 30438140-30438350,30438448-30438926
          Length = 229

 Score = 33.5 bits (73), Expect = 0.052
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = -1

Query: 298 LGLMLMCGFVLFDTXLIIEKRRMGSKDFVXHALELFIDFIGMFRRLVII 152
           L  ++ CG++++DT  +I  +R    ++V  A+ L++D I +F  L+ +
Sbjct: 177 LAALVFCGYIVYDTDNLI--KRYSYDEYVWAAVALYLDVINLFLSLLTL 223


>04_04_1347 +
           32803664-32803796,32803891-32804093,32804202-32804383,
           32804514-32804798,32804901-32804959,32805052-32805088,
           32805186-32805257,32805336-32806005
          Length = 546

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 334 CSHIFLYQAHLYLGLMLMCGFVL 266
           C  + LY  H+YLGL+L+ G V+
Sbjct: 502 CPGLELYSRHVYLGLLLISGAVM 524


>01_06_1087 -
           34430521-34430899,34432336-34432806,34432926-34433112,
           34433470-34433599,34433794-34434125,34434566-34435050,
           34435185-34435752,34436579-34436640,34437569-34437636
          Length = 893

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 147 VKIITSLLNIPIKSMNNSNACXTKSLLPILRFSMISXVSNSTK 275
           + I  S LNI ++  NN        LLP+  F+ I+  SN+T+
Sbjct: 285 INITFSWLNITVRGANNLLGLGDLELLPVFHFAEIA--SNTTR 325


>01_06_0827 + 32260313-32260525,32261862-32262716
          Length = 355

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -2

Query: 321 SCTKLIFILA-SCSCAVLYCSTH 256
           SC K + +L  +C C   YC TH
Sbjct: 297 SCKKKVGLLGFACRCGATYCGTH 319


>01_05_0668 -
           24147412-24147618,24148019-24148286,24149506-24149728,
           24149822-24149996
          Length = 290

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -2

Query: 336 YAVTFSCTKLIFILASCSCAVLYCSTHX*SLRNAEWEAKTLCXMHWNYSLTLLECS 169
           Y   ++CT LIF+ AS +  V Y S H       +W  K      WNY + L+  S
Sbjct: 134 YGPFWTCTTLIFVAASIATFVTYLS-H-------KWHKK-----EWNYDINLVTWS 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,538,827
Number of Sequences: 37544
Number of extensions: 152199
Number of successful extensions: 309
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)