Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E10
         (367 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70753-11|CAA94766.1|  244|Caenorhabditis elegans Hypothetical p...    36   0.009
AC024777-1|AAF60563.1|  133|Caenorhabditis elegans Hypothetical ...    36   0.012
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    27   5.4  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     27   5.4  

>Z70753-11|CAA94766.1|  244|Caenorhabditis elegans Hypothetical
           protein F40F9.2 protein.
          Length = 244

 Score = 35.9 bits (79), Expect = 0.009
 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = -1

Query: 322 FLYQAHLYLGLMLMCGFVLFDTXLIIEKRR--MGSKDFVXHALELFIDFIGMFRRLVII 152
           FLY  +  L  +LM  ++  D  L++  R+  +  +D++  A+E+F+D + +F  L+ I
Sbjct: 181 FLYSVYSGLAALLMMFYLAIDVQLLMGGRKYELSPEDYIFAAMEIFLDILNIFLMLLNI 239


>AC024777-1|AAF60563.1|  133|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.2 protein.
          Length = 133

 Score = 35.5 bits (78), Expect = 0.012
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = -1

Query: 322 FLYQAHLYLGLMLMCGFVLFDTXLIIEKRRM--GSKDFVXHALELFIDFIGMFRRLV 158
           FLY  +  LG +L   ++  D  LI+  RR+    ++++  A  +F+D +GMF  ++
Sbjct: 71  FLYIVYAVLGALLCMFYLAIDIQLIMGGRRVEISPEEYIFAATHVFVDILGMFLNIL 127


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 164  TGYYFDTEGGTKPPSQA 114
            TG+Y +T+G + PPSQ+
Sbjct: 1765 TGHYENTQGASSPPSQS 1781


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 164  TGYYFDTEGGTKPPSQA 114
            TG+Y +T+G + PPSQ+
Sbjct: 1759 TGHYENTQGASSPPSQS 1775


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 164  TGYYFDTEGGTKPPSQA 114
            TG+Y +T+G + PPSQ+
Sbjct: 1765 TGHYENTQGASSPPSQS 1781


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 164  TGYYFDTEGGTKPPSQA 114
            TG+Y +T+G + PPSQ+
Sbjct: 1759 TGHYENTQGASSPPSQS 1775


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 164  TGYYFDTEGGTKPPSQA 114
            TG+Y +T+G + PPSQ+
Sbjct: 1783 TGHYENTQGASSPPSQS 1799


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,852,664
Number of Sequences: 27780
Number of extensions: 147973
Number of successful extensions: 328
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)