Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E10
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.1  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   4.6  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   4.6  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   4.6  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   4.6  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    20   8.0  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    20   8.0  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 8   LKYFNQKIKKKTNIF 52
           L++F  KIK+K N+F
Sbjct: 264 LEHFEMKIKRKHNVF 278


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 150 KIITSLLNIPIKSMNN 197
           KII+SLLN  I + NN
Sbjct: 302 KIISSLLNNTIHNNNN 317


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 150 KIITSLLNIPIKSMNN 197
           KII+SLLN  I + NN
Sbjct: 313 KIISSLLNNTIHNNNN 328


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 150 KIITSLLNIPIKSMNN 197
           KII+SLLN  I + NN
Sbjct: 313 KIISSLLNNTIHNNNN 328


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 150 KIITSLLNIPIKSMNN 197
           KII+SLLN  I + NN
Sbjct: 302 KIISSLLNNTIHNNNN 317


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = +1

Query: 205 HVAQSLCFPFC 237
           H   + C PFC
Sbjct: 39  HTTNAFCLPFC 49


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = +1

Query: 205 HVAQSLCFPFC 237
           H   + C PFC
Sbjct: 38  HTTNAFCLPFC 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,503
Number of Sequences: 438
Number of extensions: 1778
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)