Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_E07
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1481 + 26860051-26860104,26861114-26861143,26861714-26863174 350 6e-97
02_03_0099 + 15206282-15206917 32 0.58
09_04_0371 - 17020539-17020607,17020697-17020747,17020888-170210... 31 1.0
11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228,530... 31 1.3
03_03_0107 + 14504065-14504448,14504545-14504922,14506011-145066... 30 1.8
11_06_0198 - 21158350-21159528 30 2.3
02_02_0652 - 12651163-12653210,12653327-12653627 29 3.1
01_05_0474 - 22552599-22552687,22553494-22553631,22553766-225544... 29 3.1
04_04_0138 + 23067885-23068245,23068393-23068634 29 4.1
02_05_0100 - 25821606-25822349 29 4.1
12_01_0627 + 5171131-5171516,5171869-5172074,5172533-5172597,517... 29 5.4
06_01_1103 + 9085156-9085602 29 5.4
02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837 29 5.4
01_06_0871 - 32604968-32605470,32605546-32605722,32605821-32606355 29 5.4
11_06_0377 - 22900042-22900452,22900527-22902236 28 7.1
09_04_0179 - 15366119-15366916 28 7.1
07_03_1299 + 25598869-25600006,25600718-25600773 28 7.1
04_03_0241 - 13243938-13244453,13244538-13246334 28 7.1
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993... 28 7.1
01_06_1475 + 37634831-37636297 28 7.1
10_08_0791 - 20590744-20591211,20591379-20591439,20591525-205915... 28 9.4
06_01_0079 - 633595-633985,634346-634543,634864-635036,635355-63... 28 9.4
05_01_0203 + 1459600-1460010 28 9.4
02_05_0968 + 33156585-33156941,33158510-33159902,33160035-331601... 28 9.4
>07_03_1481 + 26860051-26860104,26861114-26861143,26861714-26863174
Length = 514
Score = 350 bits (861), Expect = 6e-97
Identities = 159/209 (76%), Positives = 180/209 (86%)
Frame = -3
Query: 763 NVETIAVAXTICRRGGKWFASFGRQRNSGTKLFNISGHVNTPCTVEEEMSIPLKELIERH 584
NVET+AV+ TI RRG +WFASFGR+ NSGTKLF +SGHVN PCTVEEEMSIPLKELIE+H
Sbjct: 295 NVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIEKH 354
Query: 583 AGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIVMDKSTDI 404
GGV GGWDNLLAIIPGGSS PL+PK++C+ VLMD+D L A Q+ LGTAA+IVMDKSTD+
Sbjct: 355 CGGVRGGWDNLLAIIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDV 414
Query: 403 VKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEISKQIEGHT 224
V AIARL FYKHESCGQCTPCREG W+ I+ R GNA +EIDML E++KQIEGHT
Sbjct: 415 VDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHT 474
Query: 223 ICALGDGAAWPVQGLIRHFRPELERRMQE 137
ICALGD AAWPVQGLIRHFRPELERR++E
Sbjct: 475 ICALGDAAAWPVQGLIRHFRPELERRIRE 503
>02_03_0099 + 15206282-15206917
Length = 211
Score = 31.9 bits (69), Expect = 0.58
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 YNLVHPG-DTFAARSALAAGLVLVEHDESSDGLHDVS*LVHDNDGRRAQGGLR 460
Y LV P D AA +A A +V+ E DE+ GLH V LV D R A LR
Sbjct: 70 YALVLPDRDAAAASAAETAEVVVGEADEAMAGLHGVDLLVVDARRRDAAAVLR 122
>09_04_0371 -
17020539-17020607,17020697-17020747,17020888-17021058,
17023296-17023404,17023570-17023676,17024429-17024640,
17024805-17024952
Length = 288
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -3
Query: 376 FYKHESCGQCTPCREGVSW--MNKIIYRFVDGNASPKEIDMLWEISKQIE 233
+Y+++ PC EGV W M+KI G+AS ++ID+L ++ +E
Sbjct: 226 YYRYDGSLTTPPCTEGVIWTIMSKI------GDASKEQIDLLKTVATTVE 269
>11_01_0656 -
5301048-5301441,5301779-5301976,5302056-5302228,
5302691-5302935,5303014-5303191,5303578-5303760,
5303858-5303962,5304621-5304758,5304846-5305802
Length = 856
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 568 GGWDNLLA-IIPGGSSTPLIPKNVCETVLMDFDG 470
G W+++L I+P GS P P N+ ++ +++DG
Sbjct: 8 GSWEDMLRRILPPGSPIPEAPPNLDYSIALEYDG 41
>03_03_0107 +
14504065-14504448,14504545-14504922,14506011-14506619,
14507110-14507237,14507829-14507832
Length = 500
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 235 EGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKAERL 98
EG T+C + A PV+ + R P++ R + E +HG S+ E L
Sbjct: 148 EGRTMCKVAAKTA-PVRRIERAVDPDIARLLDETDVSHGGSEDEGL 192
>11_06_0198 - 21158350-21159528
Length = 392
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 446 GHGGHHCHGQVN*HREGH 393
GHGG HC Q HRE H
Sbjct: 347 GHGGDHCRRQCQHHREWH 364
>02_02_0652 - 12651163-12653210,12653327-12653627
Length = 782
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +1
Query: 79 AYCTTSTGAR---LCSVRVRPSTPACVARARAGSDV*VPAPATRLR 207
+Y TT++GA+ + RV P+T A +A + + + + PAP+T +
Sbjct: 123 SYATTTSGAKSIPAATERVFPATKASLASSTSSTTMTTPAPSTETK 168
>01_05_0474 -
22552599-22552687,22553494-22553631,22553766-22554447,
22555120-22555167,22555395-22556042,22556960-22557310,
22558622-22558690
Length = 674
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Frame = -1
Query: 267 STCCGKFRNK*K-GTRSALWAT------EPRG---RCRDSYVTSGPSSSDACRSTRPHTD 118
S CC K K K GT + ++ +P+ +C++S T+ P ++ + +
Sbjct: 233 SNCCEKLARKRKRGTEERMSSSKRQSHKDPKSLSLKCQESTPTNKPRNTSHKKGENNSSS 292
Query: 117 RAKPSACTSSAIRAERQRXTLRGSK 43
+P C + AER L GS+
Sbjct: 293 MPQPKFCDGRLMNAERNNKELNGSE 317
>04_04_0138 + 23067885-23068245,23068393-23068634
Length = 200
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 130 PSTPACVARARAGSDV*VPAPATRLRRPERRSCALLFVSKFPTACRFLSV 279
PSTP V RA P+P T + PE S L P A F+++
Sbjct: 145 PSTPTPVTVTRAPPQQMTPSPKTSSQTPEYSSGLKLIADCVPVALGFMAL 194
>02_05_0100 - 25821606-25822349
Length = 247
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -2
Query: 614 HPAQGAH*EARGRSHRRLGQPARHHTRRVLHPAHTQERLRDSIDG-LRRSSSRADLPGHG 438
HP H +G R+ P H HP H + R S G +R + RA + G G
Sbjct: 89 HPPPPPHAPFQGYQQRQWPPPRGHPWHEGPHPQHGFQASRSSAVGPIRNIAKRAVVRGGG 148
Query: 437 G 435
G
Sbjct: 149 G 149
>12_01_0627 +
5171131-5171516,5171869-5172074,5172533-5172597,
5173115-5173355,5173635-5174095
Length = 452
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -2
Query: 581 GRSHRRLGQPARHHTRRVLHPAHTQERLRDSIDGLRRSSSRADLPGHG 438
GR +R+G PAR RR L E D L+ + D G G
Sbjct: 404 GRERKRVGAPAREEERRALR-LDDMEEAEDPTTKLKTTLEGGDASGDG 450
>06_01_1103 + 9085156-9085602
Length = 148
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 632 RGGGDEHPAQGAH*EARGRSHRRLGQPARHHTRRVLHPA 516
RGGG A+G + RS GQP TRR + PA
Sbjct: 42 RGGGRCGVAEGGDGDVGRRSGAATGQPEEMSTRRKVRPA 80
>02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837
Length = 222
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -1
Query: 228 TRSALWATEPRGRCRDSYVTSGPSSSDACRSTRPHTDRAKPSACTSSAIRAERQRXTLRG 49
T S+L+ P + S PS+S A RP +PS ++A++AE Q
Sbjct: 3 TASSLFLASPVATAPTARARSTPSASPA----RPSLRLRRPSTLAAAAVQAEHQPAVAAA 58
Query: 48 SKEP 37
K P
Sbjct: 59 PKPP 62
>01_06_0871 - 32604968-32605470,32605546-32605722,32605821-32606355
Length = 404
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 284 ITIDESVYNLVHPGDTFAARSALAAGLVLVEHDESSDGLHDV 409
+T+ S Y LV P D A S++ GL ++H S G V
Sbjct: 165 VTLGASDYPLVTPDDLLYAFSSVRRGLSFIDHRMDSGGAEAV 206
>11_06_0377 - 22900042-22900452,22900527-22902236
Length = 706
Score = 28.3 bits (60), Expect = 7.1
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = -2
Query: 644 HAVHRGGG---DEHPAQGAH*EARGRSHRRLGQPARHHTRRVLHPAHTQERLRDSIDGLR 474
H HRG G E + A+ + +G P RVL + RL+D D
Sbjct: 280 HERHRGRGRVGGERQSSCANDDDQGLRGGAHDDPDEPRRGRVL--LTLRARLKDDDD--- 334
Query: 473 RSSSRADLPGHGGHHCHGQVN*HREGHRSTH 381
D G G H N +REGHRS H
Sbjct: 335 -EELMRDQEGALGDEVHRGANGYREGHRSAH 364
>09_04_0179 - 15366119-15366916
Length = 265
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 482 GLRRSSSRADLPGHGGHHCHGQVN*HREGHRSTH 381
G R +S GHG H +GQ + + EGH S H
Sbjct: 190 GQRNASGSGYGDGHGEGHGYGQGSGYGEGHGSGH 223
>07_03_1299 + 25598869-25600006,25600718-25600773
Length = 397
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -2
Query: 563 LGQPARHHTR--RVLHPAHTQERLRDSIDGLRRSSSRADLPGHGG 435
L P R H R R L P + E DS++G RR + P GG
Sbjct: 212 LEPPQRQHRRIIRRLRPRYLPELTGDSLEGYRRRTFIDVAPSRGG 256
>04_03_0241 - 13243938-13244453,13244538-13246334
Length = 770
Score = 28.3 bits (60), Expect = 7.1
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = -2
Query: 632 RGGGDEHPAQGAH*EARGRSHRRLGQPARHHTRRVLHPAHTQERLRDSIDGLRRSSSRA- 456
RG DE + RGR RR +P R HP+ + R DG + R
Sbjct: 334 RGDRDERGERSVRDGRRGRGGRRNERPWRRREYNDDHPSFFDNQRRRDHDGDDDNDGRGR 393
Query: 455 -DLPGHGGHHCHGQVN*HREGHRS 387
DL HG+ RE RS
Sbjct: 394 RDLARGRESWKHGEAKYRRERTRS 417
>01_07_0122 -
41196081-41196205,41197561-41198245,41198961-41199329,
41199405-41199514,41200539-41200833
Length = 527
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 500 LRDSIDGLRRSSSRADLPGHGGHHCHGQVN*HREGHRSTHH--VLQARVLRPVHSLPR 333
LR S+ S + + P H HH H + H GH + H QA V PVH PR
Sbjct: 330 LRHSLHSGGGSEAPSPAPMH--HHGHHHHHHHHHGHEDSRHSAPAQAPVHYPVHE-PR 384
>01_06_1475 + 37634831-37636297
Length = 488
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 222 SALWATEPRGRCRDSYVTSGPSSSDACRSTRPHTDRAKPSAC 97
+A AT P R + V P + DAC+ P T A S C
Sbjct: 126 TACGATAPFNPVRSTTVADVPCTDDACQQFAPQTCGAGASEC 167
>10_08_0791 -
20590744-20591211,20591379-20591439,20591525-20591592,
20592015-20592188,20592291-20592331,20592571-20592620,
20593083-20593171,20593250-20593324,20593631-20593719,
20593895-20593955,20594111-20594227,20594465-20594667,
20594785-20594842,20594951-20595103
Length = 568
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 479 LRRSSSRADLPGHGGH 432
LRRSSS ++PG GGH
Sbjct: 107 LRRSSSEQEVPGGGGH 122
>06_01_0079 -
633595-633985,634346-634543,634864-635036,635355-635599,
635683-635860,636291-636473,636769-636873,637709-637846,
637933-638925
Length = 867
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -3
Query: 583 AGGVTGG-WDNLLA-IIPGGSSTPLIPKNVCETVLMDFDG 470
AG V G W+ ++ ++P G++ P P N+ ++ +++DG
Sbjct: 4 AGAVGGSNWEEMVRRMLPPGTTIPEAPANLDYSIALEYDG 43
>05_01_0203 + 1459600-1460010
Length = 136
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 311 LVHPGDTFAARSALAAGLVLVEHDESSDGLHDVS*LVHDNDG 436
+ H D+ A+ S LA + ++ D+ DG + + LV DG
Sbjct: 54 VTHSKDSIASASLLATSPLFLQDDDDDDGENVIGDLVSAEDG 95
>02_05_0968 +
33156585-33156941,33158510-33159902,33160035-33160118,
33160216-33160265
Length = 627
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 438 AVPREVCAATRPSKSINTVSQTFLGMSGVEDPPGMMA 548
AV CAA P++S +T T G +G PP A
Sbjct: 254 AVLSNTCAAVAPAQSCSTEQATVHGETGNASPPSPFA 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,955,765
Number of Sequences: 37544
Number of extensions: 553753
Number of successful extensions: 2094
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2089
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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