Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_E06
(435 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0584 - 4325907-4326190,4326638-4327060,4327218-4327449 29 2.2
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 28 2.9
10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565 28 2.9
10_05_0085 - 9005539-9005922,9006207-9006463,9006707-9006883,900... 28 2.9
09_04_0085 + 14441123-14443507,14443731-14443787 28 2.9
08_02_0009 + 11216532-11218687,11220727-11225998 28 2.9
08_02_0003 + 11180421-11180757,11180773-11185715 28 2.9
08_02_0002 + 11173365-11173512,11173528-11178470 28 2.9
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 28 2.9
06_01_0223 - 1709897-1709912,1710188-1712520 28 2.9
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 28 2.9
01_01_0100 - 755894-756662,757086-757598,758718-761050 28 2.9
02_02_0337 - 9096588-9096603,9096879-9097927 28 3.8
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 28 3.8
04_04_0765 - 27910189-27912393,27912521-27912598 27 5.0
05_01_0141 - 937428-937717,938483-938705 27 6.6
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 27 6.6
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 6.6
03_05_0024 - 19934529-19935298,19935359-19935871,19936147-199366... 27 8.7
02_02_0619 - 12205718-12205845,12205941-12206142,12207240-122073... 27 8.7
>03_01_0584 - 4325907-4326190,4326638-4327060,4327218-4327449
Length = 312
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 143 EETFFSCCSDSSSAHRPRRRVTSISCGR 60
E S SD SS+ RPRRRV + + GR
Sbjct: 72 ESLAVSFSSDVSSSSRPRRRVAAAAAGR 99
>12_02_0772 -
23029703-23029715,23029835-23030463,23030637-23031673,
23031830-23032166
Length = 671
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 614 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNNNNI 663
>10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565
Length = 245
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 188 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNNNNI 237
>10_05_0085 -
9005539-9005922,9006207-9006463,9006707-9006883,
9007349-9007490,9007814-9007904,9009024-9010942
Length = 989
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 586 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNNNNI 635
>09_04_0085 + 14441123-14443507,14443731-14443787
Length = 813
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 724 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNHNNI 773
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 1425 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNHNNI 1474
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 709 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNHNNI 758
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 646 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNHNNI 695
>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
Length = 642
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 553 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNHNNI 602
>06_01_0223 - 1709897-1709912,1710188-1712520
Length = 782
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 724 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNNNNI 773
>04_03_0024 -
9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 724 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNNNNI 773
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 724 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKRIYKHQNRNHNNI 773
>02_02_0337 - 9096588-9096603,9096879-9097927
Length = 354
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 248 IYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNRGNHSMGHQSRLXNNV 397
I T + S H DY C + S+G + R HQ+R NN+
Sbjct: 296 ICTGIQAQRSMKHSDYNFCNKIVQIPLSYGEDKPRSKKIYKHQNRNNNNI 345
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 305 YSMSYKGGSHGVSQNRGNHSMGHQSRLXNNVNAC 406
++ ++G S S N NH M HQ N AC
Sbjct: 301 HTSDHEGFSREKSSNLSNHFMHHQQGFMTNYGAC 334
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 27.5 bits (58), Expect = 5.0
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = -3
Query: 268 SHQSRVDVHSSPA-----VVTHAISPLSALWTGATYGAHSIS-HGHLLKKRSLAAVVTPV 107
S + V SSPA +V + SP +A+ A +G+ ++ + L SLAAVV+PV
Sbjct: 427 SSPTAVAASSSPAASPVDIVAASSSPAAAV---AAFGSPAVVVASNSLVAGSLAAVVSPV 483
Query: 106 LHTAPAAVSH 77
T+P A +
Sbjct: 484 CATSPVAACY 493
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 184 ATYGAHSISHGH 149
A YGAH +SHGH
Sbjct: 94 AAYGAHKLSHGH 105
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 27.1 bits (57), Expect = 6.6
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = -3
Query: 238 SPAVVTHAISPLSALWTGATYGAHSISHGHLLKKRSLAAVVTPVLHTAPAAVSHQSRVDV 59
+PA A P SA G S GHLL R + T +LH +SH+S +
Sbjct: 346 TPAPAPPAGQPSSAEDRATPTGISSSHQGHLLLCRPCLSHRTGLLHR--TRLSHRSGLPP 403
Query: 58 ISEPAVVSHEIATPLA 11
++ P S + P A
Sbjct: 404 LAAPLAPSRPPSPPPA 419
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 131 RTFLQQVSMRDRMSTICCTGPKSRERRNSVSYDSW 235
R LQ R R S + T +S+ RR+SVS +W
Sbjct: 564 RDGLQCAYPRRRSSRVSATSRRSKPRRSSVSAGAW 598
>03_05_0024 -
19934529-19935298,19935359-19935871,19936147-19936635,
19936738-19937044,19937104-19937130
Length = 701
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 4 ERQPRELRSRGIQQRAQR*RPHEIDVTRRRGRCAELESLQQLKNVSSTSV 153
+RQPRE+ + +Q A+R R E + R R +E + +V
Sbjct: 78 QRQPREVEEQRTRQEAERRRLEEERQAQERDRLQHVEGTAVFRTPQQNAV 127
>02_02_0619 -
12205718-12205845,12205941-12206142,12207240-12207315,
12208073-12208278
Length = 203
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 200 RERRNSVSYDSW-TRMYIYTRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQ 346
R + S YD + +Y + W HC+ C ++ G H Q
Sbjct: 90 RAQNMSSEYDMVPNNLVLYPMMFEKRRWYHCNILGCKRLNDSTGEHSTQQ 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,968,053
Number of Sequences: 37544
Number of extensions: 203950
Number of successful extensions: 723
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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