Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_E05
         (466 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021986-1|AAH21986.1|  148|Homo sapiens mitochondrial ribosomal...    88   2e-17
BC001066-1|AAH01066.1|  148|Homo sapiens mitochondrial ribosomal...    88   2e-17
AB049647-1|BAB40852.1|  148|Homo sapiens mitochondrial ribosomal...    88   2e-17
BC040176-1|AAH40176.2|  207|Homo sapiens hypothetical protein LO...    29   7.9  
BC018203-1|AAH18203.1|  140|Homo sapiens LOC130576 protein protein.    29   7.9  
AF435957-1|AAM20908.1|  183|Homo sapiens Ly-6 antigen/uPA recept...    29   7.9  
AC009230-1|AAY14974.1|  181|Homo sapiens unknown protein.              29   7.9  

>BC021986-1|AAH21986.1|  148|Homo sapiens mitochondrial ribosomal
           protein L27 protein.
          Length = 148

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = -1

Query: 373 VRNASKKTGGSTQNTNCKVKPKHRGWKVQDGHFVQAGHMLATQRTTRFHPGLNVGFGVNG 194
           VR ASKK+GGS++N   K   + +G K  +GH+V AG+++ATQR  R+HPG +VG G N 
Sbjct: 28  VRYASKKSGGSSKNLGGKSSGRRQGIKKMEGHYVHAGNIIATQRHFRWHPGAHVGVGKNK 87

Query: 193 TLFAMEAGKVVVTCEKFDPNWDHT----WVQRMYKGRYDQTIYKKYYNVIPEPQHQRFKL 26
            L+A+E G V  T E + P+  +T     + R+ KG     +YK + +V+P      FKL
Sbjct: 88  CLYALEEGIVRYTKEVYVPHPRNTEAVDLITRLPKG---AVLYKTFVHVVPAKPEGTFKL 144

Query: 25  I 23
           +
Sbjct: 145 V 145


>BC001066-1|AAH01066.1|  148|Homo sapiens mitochondrial ribosomal
           protein L27 protein.
          Length = 148

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = -1

Query: 373 VRNASKKTGGSTQNTNCKVKPKHRGWKVQDGHFVQAGHMLATQRTTRFHPGLNVGFGVNG 194
           VR ASKK+GGS++N   K   + +G K  +GH+V AG+++ATQR  R+HPG +VG G N 
Sbjct: 28  VRYASKKSGGSSKNLGGKSSGRRQGIKKMEGHYVHAGNIIATQRHFRWHPGAHVGVGKNK 87

Query: 193 TLFAMEAGKVVVTCEKFDPNWDHT----WVQRMYKGRYDQTIYKKYYNVIPEPQHQRFKL 26
            L+A+E G V  T E + P+  +T     + R+ KG     +YK + +V+P      FKL
Sbjct: 88  CLYALEEGIVRYTKEVYVPHPRNTEAVDLITRLPKG---AVLYKTFVHVVPAKPEGTFKL 144

Query: 25  I 23
           +
Sbjct: 145 V 145


>AB049647-1|BAB40852.1|  148|Homo sapiens mitochondrial ribosomal
           protein L27 (L27mt) protein.
          Length = 148

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = -1

Query: 373 VRNASKKTGGSTQNTNCKVKPKHRGWKVQDGHFVQAGHMLATQRTTRFHPGLNVGFGVNG 194
           VR ASKK+GGS++N   K   + +G K  +GH+V AG+++ATQR  R+HPG +VG G N 
Sbjct: 28  VRYASKKSGGSSKNLGGKSSGRRQGIKKMEGHYVHAGNIIATQRHFRWHPGAHVGVGKNK 87

Query: 193 TLFAMEAGKVVVTCEKFDPNWDHT----WVQRMYKGRYDQTIYKKYYNVIPEPQHQRFKL 26
            L+A+E G V  T E + P+  +T     + R+ KG     +YK + +V+P      FKL
Sbjct: 88  CLYALEEGIVRYTKEVYVPHPRNTEAVDLITRLPKG---AVLYKTFVHVVPAKPEGTFKL 144

Query: 25  I 23
           +
Sbjct: 145 V 145


>BC040176-1|AAH40176.2|  207|Homo sapiens hypothetical protein
           LOC130576 protein.
          Length = 207

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 110 PLDPSVIPVWIKLFTCDNYFSSLHCKQ 190
           PLDP+  P   K FTC+N   + +C +
Sbjct: 74  PLDPTPFPNSFKCFTCENAGDNYNCNR 100


>BC018203-1|AAH18203.1|  140|Homo sapiens LOC130576 protein protein.
          Length = 140

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 110 PLDPSVIPVWIKLFTCDNYFSSLHCKQ 190
           PLDP+  P   K FTC+N   + +C +
Sbjct: 36  PLDPTPFPNSFKCFTCENAGDNYNCNR 62


>AF435957-1|AAM20908.1|  183|Homo sapiens Ly-6 antigen/uPA
           receptor-like domain-containing protein protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 110 PLDPSVIPVWIKLFTCDNYFSSLHCKQ 190
           PLDP+  P   K FTC+N   + +C +
Sbjct: 50  PLDPTPFPNSFKCFTCENAGDNYNCNR 76


>AC009230-1|AAY14974.1|  181|Homo sapiens unknown protein.
          Length = 181

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 110 PLDPSVIPVWIKLFTCDNYFSSLHCKQ 190
           PLDP+  P   K FTC+N   + +C +
Sbjct: 48  PLDPTPFPNSFKCFTCENAGDNYNCNR 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,476,071
Number of Sequences: 237096
Number of extensions: 1565616
Number of successful extensions: 3983
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3980
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)