Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D24
         (606 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.4  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2

Query: 200 CWCCQSL 220
           CWCC +L
Sbjct: 13  CWCCDNL 19


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 344 TYLNINNLMQISKRKAFEKIN 406
           TY+N  N + ++  K+F K N
Sbjct: 548 TYINSGNKISLATSKSFIKAN 568


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 171 LQNLTIIDSNVGVANHCFNLT*FKTSS 251
           L+N+ + DS +      F L  F+TSS
Sbjct: 284 LENIKLTDSLIAAQAFVFFLAGFETSS 310


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,088
Number of Sequences: 438
Number of extensions: 2785
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)