Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D22
         (597 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0664 + 18501248-18502802,18503370-18505054                       29   2.1  
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117...    28   6.5  
03_06_0525 + 34511025-34512168,34512710-34512886,34513131-34513447     27   8.6  
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51...    27   8.6  

>04_03_0664 + 18501248-18502802,18503370-18505054
          Length = 1079

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +2

Query: 83  MSSINVWXQLP-IGNLPYINLLYVVCLSFI 169
           +S+ + W  LP +G LP +  LY++CL+ +
Sbjct: 629 ISNCSYWQHLPPLGELPSLKYLYLICLNSV 658


>01_01_0128 -
           1167904-1168749,1168790-1168863,1169419-1169491,
           1171148-1171398,1171442-1171687,1172220-1172415,
           1172796-1172876,1172966-1173169,1173671-1173880,
           1173953-1174174,1174437-1174480,1174974-1175052,
           1175066-1175227,1175337-1175564,1175786-1175815,
           1175905-1176273,1176356-1176571,1177202-1177683,
           1177930-1177975
          Length = 1352

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 221 IYFLCV*ISYYLLDLVCL*MIGKLHIIG*CMEDFLSVIA 105
           IYF  V   Y+ L +  + + G L I   C+ + LSV+A
Sbjct: 529 IYFFIVLFPYFKLGVTVVDIFGNLDIESDCLSNHLSVLA 567


>03_06_0525 + 34511025-34512168,34512710-34512886,34513131-34513447
          Length = 545

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 388 KLH-FPIKSKTNHLHWSQLISYLIIKKKYYQC 480
           K H + +K K  H  W +L +Y +I+++Y+ C
Sbjct: 255 KFHQYSLKFKL-HAKWGKLPNYAVIEQRYFDC 285


>01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-514521,
            514598-514736,514823-514923,514995-515666,515953-516038,
            516112-516777,516874-517128,517231-517358,518645-518799,
            518880-519133,519186-519260,519324-519399,519511-519644,
            519871-520153,520692-520850,520940-521038,521142-521310,
            521423-521653,522002-522114,524179-524310,524389-524469,
            525641-525763
          Length = 1570

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +1

Query: 67   PXFNSHVFNQCLAAITDRKSS 129
            P F+S++FN+ L++++DRK S
Sbjct: 1456 PNFSSYLFNEYLSSMSDRKLS 1476


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,531,607
Number of Sequences: 37544
Number of extensions: 242421
Number of successful extensions: 457
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)