Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D22
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029267-1|ABK30904.1|  181|Drosophila melanogaster IP07260p pro...    29   6.3  
AY880250-1|AAX11177.1|  407|Drosophila melanogaster ligand-gated...    29   6.3  
AY880249-1|AAX11176.1|  432|Drosophila melanogaster ligand-gated...    29   6.3  
AY880248-1|AAX11175.1|  449|Drosophila melanogaster ligand-gated...    29   6.3  
AE014296-2589|ABC66136.2|  779|Drosophila melanogaster CG33989-P...    29   6.3  
AE014296-2588|ABC66135.2|  762|Drosophila melanogaster CG33989-P...    29   6.3  
AE014296-2587|AAF49571.3|  737|Drosophila melanogaster CG33989-P...    29   6.3  

>BT029267-1|ABK30904.1|  181|Drosophila melanogaster IP07260p
           protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 41  LNVHTVKRLLXSTL-----MSSINVWXQLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 202
           LN  T      STL     ++++NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 110 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFI-YASLLEFVCVNYVGRKRPLHNVVY 167


>AY880250-1|AAX11177.1|  407|Drosophila melanogaster ligand-gated
           ion channel pHCl-C protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 41  LNVHTVKRLLXSTL-----MSSINVWXQLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 202
           LN  T      STL     ++++NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 255 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFI-YASLLEFVCVNYVGRKRPLHNVVY 312


>AY880249-1|AAX11176.1|  432|Drosophila melanogaster ligand-gated
           ion channel pHCl-B protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 41  LNVHTVKRLLXSTL-----MSSINVWXQLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 202
           LN  T      STL     ++++NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 280 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFI-YASLLEFVCVNYVGRKRPLHNVVY 337


>AY880248-1|AAX11175.1|  449|Drosophila melanogaster ligand-gated
           ion channel pHCl-A protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 41  LNVHTVKRLLXSTL-----MSSINVWXQLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 202
           LN  T      STL     ++++NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 280 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFI-YASLLEFVCVNYVGRKRPLHNVVY 337


>AE014296-2589|ABC66136.2|  779|Drosophila melanogaster CG33989-PF,
           isoform F protein.
          Length = 779

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 41  LNVHTVKRLLXSTL-----MSSINVWXQLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 202
           LN  T      STL     ++++NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 610 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFI-YASLLEFVCVNYVGRKRPLHNVVY 667


>AE014296-2588|ABC66135.2|  762|Drosophila melanogaster CG33989-PE,
           isoform E protein.
          Length = 762

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 41  LNVHTVKRLLXSTL-----MSSINVWXQLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 202
           LN  T      STL     ++++NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 610 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFI-YASLLEFVCVNYVGRKRPLHNVVY 667


>AE014296-2587|AAF49571.3|  737|Drosophila melanogaster CG33989-PD,
           isoform D protein.
          Length = 737

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 41  LNVHTVKRLLXSTL-----MSSINVWXQLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 202
           LN  T      STL     ++++NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 585 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFI-YASLLEFVCVNYVGRKRPLHNVVY 642


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,003,192
Number of Sequences: 53049
Number of extensions: 448124
Number of successful extensions: 936
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)