Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D22
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016419-3|AAG24048.1|  529|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z75554-6|CAA99958.1|  304|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AL117193-9|CAB60302.2|  737|Caenorhabditis elegans Hypothetical ...    27   7.7  
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical...    27   7.7  

>AF016419-3|AAG24048.1|  529|Caenorhabditis elegans Hypothetical
           protein F07G11.3 protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 142 IICSLPIIYRHTKSNK*YEIHTHKKYIIILNLALVGS 252
           +IC  P+       N  + +H +KKY   +NL LV S
Sbjct: 169 VICVAPLFVSEQWQNFLFAVHIYKKYGAFVNLYLVSS 205


>Z75554-6|CAA99958.1|  304|Caenorhabditis elegans Hypothetical
           protein ZC455.7 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 217 YIIILNLALVGSTLYIHIIVSLN*FYFNLEDAIFFNCF 330
           YIII+ +A + + L + I+   N F+ NL+  I+F  F
Sbjct: 7   YIIIVLIASIATILCLLIVGRSNTFHPNLQGPIWFTAF 44


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 142 IICSLPIIYRHTKSNK*YEIHTHKKYIIILNLALVGS 252
           ++C+ P+       N  + +H +KK+   +NL LV S
Sbjct: 131 VVCTSPLFVSEQWQNFLFAVHIYKKFDAHMNLYLVSS 167


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 142 IICSLPIIYRHTKSNK*YEIHTHKKYIIILNLALVGS 252
           ++C+ P+       N  + +H +KK+   +NL LV S
Sbjct: 158 VVCTSPLFVSEQWQNFLFAVHIYKKFDAHMNLYLVSS 194


>AL117193-9|CAB60302.2|  737|Caenorhabditis elegans Hypothetical
           protein Y105C5A.15 protein.
          Length = 737

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -1

Query: 45  LRFCIDDFKKELSR 4
           LRFC DD K ELSR
Sbjct: 347 LRFCADDLKNELSR 360


>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
            protein Y47G6A.17 protein.
          Length = 1736

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 111  NCXQTLIEDMRVEXRR-RLTVCTLRFCIDDFKKELSRL 1
            N  +  + D+RVE  R R T  TLR   ++ K ELSRL
Sbjct: 1355 NSDERRMTDLRVELDRLRTTNRTLRNANEEMKNELSRL 1392


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,848,906
Number of Sequences: 27780
Number of extensions: 254783
Number of successful extensions: 527
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)