Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D21
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071278-1|AAL48900.1|  347|Drosophila melanogaster RE30702p pro...    31   1.3  
AY071013-1|AAL48635.1|  361|Drosophila melanogaster RE09223p pro...    30   2.2  
AE014297-3198|AAF56032.1|  361|Drosophila melanogaster CG6949-PA...    30   2.2  

>AY071278-1|AAL48900.1|  347|Drosophila melanogaster RE30702p
           protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = +3

Query: 81  CNKTSSRHCEHKTNDIIICSRYFFCENSHHN-CLSRFYFAVVERQNVSVVTYHTY 242
           C    +  C +  N++   + Y  C N+H+N C +  Y       N     Y+ Y
Sbjct: 230 CTNNHNNLCTNNHNNLCTNNHYNLCTNNHNNLCTNNHYNLCTNNHNHVYTRYYNY 284


>AY071013-1|AAL48635.1|  361|Drosophila melanogaster RE09223p
           protein.
          Length = 361

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 305 IVKNITVPNDVII*YILFHSQVCMICNDRYILSLNHCEIETRKTIMMTIFTKKISGTY 132
           + + IT  N      + FHSQ  +   DR+   ++  EI T+  +   +F K IS  Y
Sbjct: 230 VTEVITKENQFAQVTVRFHSQQMLAIYDRFGRLMHGSEIITKDVLEYVVFEKHISNEY 287


>AE014297-3198|AAF56032.1|  361|Drosophila melanogaster CG6949-PA
           protein.
          Length = 361

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 305 IVKNITVPNDVII*YILFHSQVCMICNDRYILSLNHCEIETRKTIMMTIFTKKISGTY 132
           + + IT  N      + FHSQ  +   DR+   ++  EI T+  +   +F K IS  Y
Sbjct: 230 VTEVITKENQFAQVTVRFHSQQMLAIYDRFGRLMHGSEIITKDVLEYVVFEKHISNEY 287


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,271,879
Number of Sequences: 53049
Number of extensions: 435207
Number of successful extensions: 854
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)