Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_D18
(649 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 29 0.039
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 26 0.27
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.83
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.83
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.83
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 24 1.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 1.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 1.9
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 4.4
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 22 5.9
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 7.8
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 29.1 bits (62), Expect = 0.039
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 428 ISPPLPPEAIHLPQ-TEKANVKMVDLCPVIIRT*LPVKQSHSRTVLS 565
+S P PP A ++PQ T + + + P+I +PV Q + T+LS
Sbjct: 762 VSIPPPPSAQNVPQNTNSQAIPRIPILPMIPVYCVPVPQVNDSTILS 808
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 26.2 bits (55), Expect = 0.27
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 423 PSYLHHCHQKQSI--FHKRKRPT--*KWLTYVLSLFELDYQLNNP 545
P + HH HQ QS+ H R+ PT + +YV S++ Q P
Sbjct: 349 PPHHHHHHQTQSLQHLHYRQPPTLSESYSSYVNSMYASGAQFATP 393
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.6 bits (51), Expect = 0.83
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -1
Query: 514 NDRT*VNHFHVGLFRLWKMDCFWWQWWRYDGLGFIYWRSSRFVTP 380
+D T V H + +W W+ +DG+ +IY +S P
Sbjct: 83 DDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVP 127
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.83
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +2
Query: 314 EPDDRTVPSRLKAKACMGAVCAGGNEAAGPPVDKSQTIISPPLPPEAIH 460
+ ++ P R ++A + + A G S I PPLPP +H
Sbjct: 399 DSEEHLTPKRFHSRAASKEDLSPSSLADGARFGGSCLIHGPPLPPLPLH 447
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.83
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +2
Query: 314 EPDDRTVPSRLKAKACMGAVCAGGNEAAGPPVDKSQTIISPPLPPEAIH 460
+ ++ P R ++A + + A G S I PPLPP +H
Sbjct: 399 DSEEHLTPKRFHSRAASKEDLSPSSLADGARFGGSCLIHGPPLPPLPLH 447
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 189 SSPCKRLAFYKTQFTTCCWHX*EQC 115
S PC+ K Q TCCW +QC
Sbjct: 450 SLPCEPGMIKKQQGDTCCWVC-DQC 473
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 229 KRRQISITIICH*KFXL*KACILQDAIYYLLLAXMRAV 116
KR+++ I I+C + + CI + +Y L AV
Sbjct: 413 KRKELFIAIVCFVSYLIGLFCITEGGMYVFQLLDSYAV 450
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 229 KRRQISITIICH*KFXL*KACILQDAIYYLLLAXMRAV 116
KR+++ I I+C + + CI + +Y L AV
Sbjct: 466 KRKELFIAIVCFVSYLIGLFCITEGGMYVFQLLDSYAV 503
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 189 SSPCKRLAFYKTQFTTCCWHX*EQC 115
S PC+ K Q TCCW +QC
Sbjct: 540 SLPCEPGMIKKQQGDTCCWVC-DQC 563
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 466 WKMDCFWWQWWRYDGLGFI 410
+ MDC++ Q WR L F+
Sbjct: 83 YSMDCYFRQSWRDSRLSFL 101
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -1
Query: 490 FHVGLFRLWKMDCFWWQWWRYDGLGFIYWRSSRFVTP 380
FHV L +W+ W+ +D + I +S P
Sbjct: 82 FHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVP 118
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 145 YLLLAXMRAVLNEIWGLVXD 86
++L A+LNE W LV D
Sbjct: 8 FVLNRIQYAILNEAWRLVAD 27
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 203 DCNRYLSSFGIGLFRVSSMGDSSVMAVKSHN 295
DC+ Y+S + + ++MG S + HN
Sbjct: 177 DCHNYMSELTVDILLETAMGVSK--PTRDHN 205
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,808
Number of Sequences: 438
Number of extensions: 3822
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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