Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D17
         (335 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37 pro...   110   1e-24
D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37 pro...   110   1e-24
CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.               110   1e-24
BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.       110   1e-24
BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37 p...   110   1e-24
AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37 p...   110   1e-24
S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37 pro...   107   6e-24
AL355305-3|CAI14559.1|  436|Homo sapiens protein ( Human DNA seq...    30   2.0  
AL355305-2|CAI14560.1|  360|Homo sapiens protein ( Human DNA seq...    30   2.0  
BC033448-1|AAH33448.1|  460|Homo sapiens chromosome 6 open readi...    29   4.7  

>L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  110 bits (264), Expect = 1e-24
 Identities = 48/70 (68%), Positives = 53/70 (75%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 105 XXRMRHLKIV 76
             RMRHLKIV
Sbjct: 61  TGRMRHLKIV 70


>D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  110 bits (264), Expect = 1e-24
 Identities = 48/70 (68%), Positives = 53/70 (75%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 105 XXRMRHLKIV 76
             RMRHLKIV
Sbjct: 61  TGRMRHLKIV 70


>CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.
          Length = 97

 Score =  110 bits (264), Expect = 1e-24
 Identities = 48/70 (68%), Positives = 53/70 (75%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 105 XXRMRHLKIV 76
             RMRHLKIV
Sbjct: 61  TGRMRHLKIV 70


>BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.
          Length = 97

 Score =  110 bits (264), Expect = 1e-24
 Identities = 48/70 (68%), Positives = 53/70 (75%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 105 XXRMRHLKIV 76
             RMRHLKIV
Sbjct: 61  TGRMRHLKIV 70


>BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  110 bits (264), Expect = 1e-24
 Identities = 48/70 (68%), Positives = 53/70 (75%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 105 XXRMRHLKIV 76
             RMRHLKIV
Sbjct: 61  TGRMRHLKIV 70


>AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  110 bits (264), Expect = 1e-24
 Identities = 48/70 (68%), Positives = 53/70 (75%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 105 XXRMRHLKIV 76
             RMRHLKIV
Sbjct: 61  TGRMRHLKIV 70


>S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  107 bits (258), Expect = 6e-24
 Identities = 47/70 (67%), Positives = 52/70 (74%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 105 XXRMRHLKIV 76
             RM HLKIV
Sbjct: 61  TGRMSHLKIV 70


>AL355305-3|CAI14559.1|  436|Homo sapiens protein ( Human DNA
           sequence from clone RP11-487F23 on chromosome 6. ).
          Length = 436

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 193 IKMRPMWISCSKITXLPLVSEG*AQEDYW 107
           IK RP W  CSK   LP V+E  ++   W
Sbjct: 253 IKRRPPWQICSKFGALPFVAEKPSRTTSW 281


>AL355305-2|CAI14560.1|  360|Homo sapiens protein ( Human DNA
           sequence from clone RP11-487F23 on chromosome 6. ).
          Length = 360

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 193 IKMRPMWISCSKITXLPLVSEG*AQEDYW 107
           IK RP W  CSK   LP V+E  ++   W
Sbjct: 177 IKRRPPWQICSKFGALPFVAEKPSRTTSW 205


>BC033448-1|AAH33448.1|  460|Homo sapiens chromosome 6 open reading
           frame 182 protein.
          Length = 460

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 193 IKMRPMWISCSKITXLPLVSE 131
           IK RP W  CSK   LP V+E
Sbjct: 253 IKRRPPWQICSKFGALPFVAE 273


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,483,027
Number of Sequences: 237096
Number of extensions: 829933
Number of successful extensions: 1522
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)