Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D17
         (335 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    92   8e-20
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    89   7e-19
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.21 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.27 
U40939-1|AAA81700.1|  186|Caenorhabditis elegans Hypothetical pr...    29   1.1  
AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine re...    27   3.3  
L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical pr...    27   4.4  
L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical pr...    27   4.4  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 92.3 bits (219), Expect = 8e-20
 Identities = 39/70 (55%), Positives = 49/70 (70%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 105 XXRMRHLKIV 76
             R RHL+ V
Sbjct: 61  TGRTRHLRDV 70


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 89.0 bits (211), Expect = 7e-19
 Identities = 38/70 (54%), Positives = 48/70 (68%)
 Frame = -3

Query: 285 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRXYHWSVKAXXXXXXX 106
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 105 XXRMRHLKIV 76
             R RHL+ V
Sbjct: 61  TGRTRHLRDV 70


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.21
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 267 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 160
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.27
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 267 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 160
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>U40939-1|AAA81700.1|  186|Caenorhabditis elegans Hypothetical
           protein F13D11.3 protein.
          Length = 186

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 26  WAALVSLL*NHYGSASCTIFKXRM-RPVPVVFLRLAFT 136
           W  ++       G+AS  +   RM RPVP V+LR  +T
Sbjct: 137 WRQMIDFEKQRNGNASVELISGRMARPVPSVYLRRVYT 174


>AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein68 protein.
          Length = 299

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 174 HIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPS 281
           H G +++F  +++++  F I+   +F  +  L+Y S
Sbjct: 77  HCGFVILFCYELSVFTHFAISINRFFAVWMPLKYES 112


>L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical
           protein F44E2.6b protein.
          Length = 145

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -3

Query: 312 LFRIVK-SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 163
           ++R+ + S   T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 31  VYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 81


>L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical
           protein F44E2.6 protein.
          Length = 152

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -3

Query: 312 LFRIVK-SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 163
           ++R+ + S   T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 38  VYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,427,805
Number of Sequences: 27780
Number of extensions: 130498
Number of successful extensions: 294
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)