Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D10
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0420 + 2998269-2999195                                           30   1.9  
10_01_0209 + 2236530-2237301,2239196-2239297,2239535-2239716,224...    28   5.9  

>06_01_0420 + 2998269-2999195
          Length = 308

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 660 REXNRAYAQSRSWCGDDSGSRALRGHRTRDSLFIRQNPQ 544
           R   R   + R+ CG++ G  A+RG R   +  +R  P+
Sbjct: 264 RRRRREEMERRAMCGEELGRMAVRGSRMPSAKMVRTRPE 302


>10_01_0209 +
           2236530-2237301,2239196-2239297,2239535-2239716,
           2240210-2240420,2240526-2240766,2240861-2241011,
           2241116-2241424
          Length = 655

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -3

Query: 122 LDLIVQKTEDLDGQRLL--DTSGRNGNFDCFDFDDYLQ 15
           + L  ++T++L G+  L  D  G+N  F  F+FD  L+
Sbjct: 294 MGLQARRTDNLQGEEELVWDLEGKNPEFSVFEFDQVLE 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,739,901
Number of Sequences: 37544
Number of extensions: 256370
Number of successful extensions: 452
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)