Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D10
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical pr...   118   4e-27
Z46934-7|CAA87047.1|  472|Caenorhabditis elegans Hypothetical pr...   110   8e-25
AL032632-12|CAA21589.3|  333|Caenorhabditis elegans Hypothetical...    60   1e-09

>U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical
           protein C44B7.10 protein.
          Length = 471

 Score =  118 bits (284), Expect = 4e-27
 Identities = 54/74 (72%), Positives = 65/74 (87%)
 Frame = -3

Query: 671 TKKGESXIVPTLKVGAGVVTTRAHVHYVVTEQGIAYLFGKTLRQRAYELIKIAHPDHREA 492
           +KKG+S IVPT+  GAGVVT+RAHVHYVVTE GIA L+GK +RQRAYELIKI+HP  RE+
Sbjct: 396 SKKGQSKIVPTINEGAGVVTSRAHVHYVVTEYGIAQLWGKNMRQRAYELIKISHPSQRES 455

Query: 491 LEKAAFERLKCMPA 450
           L+KAAF+RLK MP+
Sbjct: 456 LDKAAFDRLKVMPS 469


>Z46934-7|CAA87047.1|  472|Caenorhabditis elegans Hypothetical
           protein ZK1320.9 protein.
          Length = 472

 Score =  110 bits (265), Expect = 8e-25
 Identities = 51/74 (68%), Positives = 62/74 (83%)
 Frame = -3

Query: 671 TKKGESXIVPTLKVGAGVVTTRAHVHYVVTEQGIAYLFGKTLRQRAYELIKIAHPDHREA 492
           T KG++ IVP L  G+GVVTTRAH  Y+VTE GIA L+GK++RQRAYELI+I+HPD REA
Sbjct: 398 TTKGQTKIVPFLTQGSGVVTTRAHARYIVTEHGIANLWGKSIRQRAYELIQISHPDDREA 457

Query: 491 LEKAAFERLKCMPA 450
           LEKAAF+R K MP+
Sbjct: 458 LEKAAFDRFKVMPS 471


>AL032632-12|CAA21589.3|  333|Caenorhabditis elegans Hypothetical
           protein Y11D7A.1 protein.
          Length = 333

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = -3

Query: 671 TKKGESXIVPTLKVGAGVVTTRAHVHYVVTEQGIAYLFGKTLR 543
           T KG++ IVP L  G+GVVTTRAH  Y+VTE GIA+L+GK++R
Sbjct: 291 TTKGQTKIVPFLAQGSGVVTTRAHAIYIVTEHGIAHLWGKSIR 333


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,256,000
Number of Sequences: 27780
Number of extensions: 245289
Number of successful extensions: 522
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)