Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_D08
(380 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa su... 63 3e-10
BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase comple... 59 4e-09
BC012621-1|AAH12621.1| 195|Homo sapiens KLRG1 protein protein. 29 3.8
AF097358-1|AAD03719.1| 189|Homo sapiens mast cell function-asso... 29 3.8
AF081675-1|AAC32200.1| 189|Homo sapiens ITIM-containing recepto... 29 3.8
AF034952-1|AAC34731.1| 189|Homo sapiens mast cell function-asso... 29 3.8
BC016742-1|AAH16742.1| 199|Homo sapiens DnaJ (Hsp40) homolog, s... 29 6.6
AF368276-1|AAK60571.1| 199|Homo sapiens beta cysteine string pr... 29 6.6
>L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa
subunit protein.
Length = 102
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 216 ITLFS-IVGFVWGYIVQQFSQSVYXXXXXXXXXXXLTVPPWPMYRRNPLNW---QVPKNG 49
I LFS IVGF++GY+ +QF +VY LT+PPWP+YRR+PL W Q
Sbjct: 27 IYLFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIYRRHPLKWLPVQESSTD 86
Query: 48 DDKPASQERKEVKXN 4
D KP ++ K N
Sbjct: 87 DKKPGERKIKRHAKN 101
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 295 MDFFTSIPTHIDYVGQAKAEKLXQG 221
++ +S+PT +DY GQ AE++ QG
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQG 26
>BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase complex
subunit 1 homolog (S. cerevisiae) protein.
Length = 104
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = -3
Query: 225 RAIITLFSIVGFVWGYIVQQFSQSVYXXXXXXXXX--XXLTVPPWPMYRRNPLNW---QV 61
+ II +IVGF++GY+ +QF +VY LT+PPWP+YRR+PL W Q
Sbjct: 25 QGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLAQLTLPPWPIYRRHPLKWLPVQE 84
Query: 60 PKNGDDKPASQERKEVKXN 4
D KP ++ K N
Sbjct: 85 SSTDDKKPGERKIKRHAKN 103
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 295 MDFFTSIPTHIDYVGQAKAEKLXQG 221
++ +S+PT +DY GQ AE++ QG
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQG 26
>BC012621-1|AAH12621.1| 195|Homo sapiens KLRG1 protein protein.
Length = 195
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = -2
Query: 304 FSKMDFFTSIPTHIDYVGQAKAEKLXQGNNYIVQYSWFCMGLYSSAILAVSVYSWCRISA 125
+S ++ T+ DY Q K+ + +V + +GL ++ +L+V +Y W
Sbjct: 7 YSMLELPTATQAQNDYGPQQKSSSSRPSCSCLVAIA---LGLLTAVLLSVLLYQWILCQG 63
Query: 124 CCHSYCSSMANVP 86
+S C+S + P
Sbjct: 64 SNYSTCASCPSCP 76
>AF097358-1|AAD03719.1| 189|Homo sapiens mast cell
function-associated antigen homolog protein.
Length = 189
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = -2
Query: 304 FSKMDFFTSIPTHIDYVGQAKAEKLXQGNNYIVQYSWFCMGLYSSAILAVSVYSWCRISA 125
+S ++ T+ DY Q K+ + +V + +GL ++ +L+V +Y W
Sbjct: 7 YSMLELPTATQAQNDYGPQQKSSSSRPSCSCLVAIA---LGLLTAVLLSVLLYQWILCQG 63
Query: 124 CCHSYCSSMANVP 86
+S C+S + P
Sbjct: 64 SNYSTCASCPSCP 76
>AF081675-1|AAC32200.1| 189|Homo sapiens ITIM-containing receptor
MAFA-L protein.
Length = 189
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = -2
Query: 304 FSKMDFFTSIPTHIDYVGQAKAEKLXQGNNYIVQYSWFCMGLYSSAILAVSVYSWCRISA 125
+S ++ T+ DY Q K+ + +V + +GL ++ +L+V +Y W
Sbjct: 7 YSMLELPTATQAQNDYGPQQKSSSSRPSCSCLVAIA---LGLLTAVLLSVLLYQWILCQG 63
Query: 124 CCHSYCSSMANVP 86
+S C+S + P
Sbjct: 64 SNYSTCASCPSCP 76
>AF034952-1|AAC34731.1| 189|Homo sapiens mast cell
function-associated antigen protein.
Length = 189
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = -2
Query: 304 FSKMDFFTSIPTHIDYVGQAKAEKLXQGNNYIVQYSWFCMGLYSSAILAVSVYSWCRISA 125
+S ++ T+ DY Q K+ + +V + +GL ++ +L+V +Y W
Sbjct: 7 YSMLELPTATQAQNDYGPQQKSSSSKPSCSCLVAIT---LGLLTAVLLSVLLYQWILCQG 63
Query: 124 CCHSYCSSMANVP 86
+S C+S + P
Sbjct: 64 SNYSTCASCPSCP 76
>BC016742-1|AAH16742.1| 199|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 5 beta protein.
Length = 199
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -2
Query: 220 NNYIVQYSWFCMGLYSSAILAVSVYSWCRISACCHSYC 107
N Y + SW+ L+ L Y C + CC+ C
Sbjct: 100 NTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCC 137
>AF368276-1|AAK60571.1| 199|Homo sapiens beta cysteine string
protein protein.
Length = 199
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -2
Query: 220 NNYIVQYSWFCMGLYSSAILAVSVYSWCRISACCHSYC 107
N Y + SW+ L+ L Y C + CC+ C
Sbjct: 100 NTYFMLSSWWAKALFVIVGLLTGCYFCCCLCCCCNCCC 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,030,590
Number of Sequences: 237096
Number of extensions: 917209
Number of successful extensions: 1981
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1979
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -