Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_D05
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein. 104 3e-22
AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2... 103 4e-22
BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2... 103 5e-22
BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2... 103 5e-22
BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2... 103 5e-22
AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2... 101 3e-21
BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2... 90 5e-18
BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2... 90 5e-18
BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2... 90 5e-18
AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein. 90 5e-18
BC104483-1|AAI04484.1| 495|Homo sapiens SUV420H1 protein protein. 36 0.16
BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegati... 36 0.16
BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegati... 36 0.16
BC098121-1|AAH98121.1| 471|Homo sapiens SUV420H1 protein protein. 36 0.16
BC012933-1|AAH12933.1| 414|Homo sapiens SUV420H1 protein protein. 36 0.16
AK000046-1|BAA90905.1| 414|Homo sapiens protein ( Homo sapiens ... 36 0.16
AL133230-3|CAI21688.2| 946|Homo sapiens chromosome 20 open read... 30 6.0
>Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein.
Length = 370
Score = 104 bits (249), Expect = 3e-22
Identities = 45/117 (38%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQSLDRH 459
L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F+++D+
Sbjct: 250 LSVSFVSENSVVAAGHDCCPMLFIYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKR 309
Query: 458 ARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFEG 288
A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +G
Sbjct: 310 ATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQG 366
>AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 365
Score = 103 bits (248), Expect = 4e-22
Identities = 45/117 (38%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQSLDRH 459
L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F+++D+
Sbjct: 245 LSVSFVSENSVVAAGHDCCPMLFNYDDHGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKR 304
Query: 458 ARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFEG 288
A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +G
Sbjct: 305 ATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQG 361
>BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 103 bits (247), Expect = 5e-22
Identities = 45/117 (38%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQSLDRH 459
L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F+++D+
Sbjct: 250 LSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKR 309
Query: 458 ARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFEG 288
A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +G
Sbjct: 310 ATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQG 366
>BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 103 bits (247), Expect = 5e-22
Identities = 45/117 (38%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQSLDRH 459
L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F+++D+
Sbjct: 250 LSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKR 309
Query: 458 ARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFEG 288
A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +G
Sbjct: 310 ATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQG 366
>BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 103 bits (247), Expect = 5e-22
Identities = 45/117 (38%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQSLDRH 459
L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F+++D+
Sbjct: 250 LSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKR 309
Query: 458 ARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFEG 288
A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +G
Sbjct: 310 ATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQG 366
>AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 401
Score = 101 bits (241), Expect = 3e-21
Identities = 44/116 (37%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQSLDRH 459
L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F+++D+
Sbjct: 281 LSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKR 340
Query: 458 ARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 291
A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +
Sbjct: 341 ATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 396
>BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 90.2 bits (214), Expect = 5e-18
Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 5/120 (4%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD--IKYVAKLDNTQRKESGGLSAMKKFQSLDR 462
L ++IT NSL+ AGH C P+L+ +D + + +LD ++ GL+A ++FQ+LD+
Sbjct: 248 LALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRGLTARERFQNLDK 307
Query: 461 HARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 291
A E + LDS+H+N++S I++ G K+ ++F T+G+DG + IWD+ +LE + +
Sbjct: 308 KASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALK 367
>BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 90.2 bits (214), Expect = 5e-18
Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 5/120 (4%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD--IKYVAKLDNTQRKESGGLSAMKKFQSLDR 462
L ++IT NSL+ AGH C P+L+ +D + + +LD ++ GL+A ++FQ+LD+
Sbjct: 248 LALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRGLTARERFQNLDK 307
Query: 461 HARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 291
A E + LDS+H+N++S I++ G K+ ++F T+G+DG + IWD+ +LE + +
Sbjct: 308 KASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALK 367
>BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 90.2 bits (214), Expect = 5e-18
Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 5/120 (4%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD--IKYVAKLDNTQRKESGGLSAMKKFQSLDR 462
L ++IT NSL+ AGH C P+L+ +D + + +LD ++ GL+A ++FQ+LD+
Sbjct: 248 LALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRGLTARERFQNLDK 307
Query: 461 HARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 291
A E + LDS+H+N++S I++ G K+ ++F T+G+DG + IWD+ +LE + +
Sbjct: 308 KASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALK 367
>AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein.
Length = 372
Score = 90.2 bits (214), Expect = 5e-18
Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 5/120 (4%)
Frame = -1
Query: 635 LGCSWITXNSLIVAGHSCIPLLYCHDGDD--IKYVAKLDNTQRKESGGLSAMKKFQSLDR 462
L ++IT NSL+ AGH C P+L+ +D + + +LD ++ GL+A ++FQ+LD+
Sbjct: 248 LALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRGLTARERFQNLDK 307
Query: 461 HARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 291
A E + LDS+H+N++S I++ G K+ ++F T+G+DG + IWD+ +LE + +
Sbjct: 308 KASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLESALK 367
>BC104483-1|AAI04484.1| 495|Homo sapiens SUV420H1 protein protein.
Length = 495
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 563 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 399
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 361 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 412
>BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1, isoform 1 protein.
Length = 885
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 563 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 399
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 751 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 802
>BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 885
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 563 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 399
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 751 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 802
>BC098121-1|AAH98121.1| 471|Homo sapiens SUV420H1 protein protein.
Length = 471
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 563 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 399
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 337 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 388
>BC012933-1|AAH12933.1| 414|Homo sapiens SUV420H1 protein protein.
Length = 414
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 563 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 399
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 280 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 331
>AK000046-1|BAA90905.1| 414|Homo sapiens protein ( Homo sapiens
cDNA FLJ20039 fis, clone COL00364. ).
Length = 414
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 563 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 399
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 280 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 331
>AL133230-3|CAI21688.2| 946|Homo sapiens chromosome 20 open reading
frame 175 protein.
Length = 946
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 68 CIFESFKFLRAEFTLDCFDLF 130
CI ESF FL A+F LD LF
Sbjct: 566 CILESFAFLNADFALDELSLF 586
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,520,155
Number of Sequences: 237096
Number of extensions: 1534659
Number of successful extensions: 3089
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3075
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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