Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_D04
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0755 - 20329127-20329189,20329276-20329389,20329465-203296... 66 3e-11
03_01_0159 + 1298002-1298070,1298181-1298264,1300354-1300506,130... 64 8e-11
04_04_0902 - 29262611-29262673,29262796-29262909,29262995-292631... 50 1e-06
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 43 2e-04
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 42 4e-04
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 42 4e-04
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 42 4e-04
04_04_1516 - 34122205-34122348,34122430-34122534,34122878-341230... 42 5e-04
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 41 7e-04
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 41 9e-04
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 41 9e-04
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 40 0.002
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 38 0.006
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 37 0.014
10_02_0151 + 5895708-5895736,5896291-5896403,5897956-5898064,589... 36 0.033
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 34 0.075
01_01_1187 + 9444742-9445317 34 0.100
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 33 0.13
01_07_0028 - 40588611-40588718,40588812-40588901,40589966-405901... 33 0.17
09_02_0429 + 9306862-9306970,9307834-9307942,9308538-9308616,930... 32 0.30
>10_08_0755 -
20329127-20329189,20329276-20329389,20329465-20329617,
20331790-20332035
Length = 191
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
WRPAIT+KQIL+GIQDLL++PN DPAQ + Y I+ Q++ EY +
Sbjct: 135 WRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEYKR 178
>03_01_0159 +
1298002-1298070,1298181-1298264,1300354-1300506,
1300589-1300702,1300814-1300876
Length = 160
Score = 64.1 bits (149), Expect = 8e-11
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
WRPAIT+KQIL+GIQDLL++PN DPAQ + Y ++ Q+ EY +
Sbjct: 104 WRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKR 147
>04_04_0902 -
29262611-29262673,29262796-29262909,29262995-29263141,
29264922-29265005,29265151-29265225
Length = 160
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
W+P+IT++QIL+GIQ+L ++PN AQ +Y +Y ++ EY K
Sbjct: 104 WKPSITVRQILIGIQELFDDPNPNSAAQNISYELYRKDMEEYRK 147
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
W PA+TI ++LL I LL +PN DP E +Y R Y++
Sbjct: 93 WSPALTISKVLLSISSLLTDPNPDDPLVPEIAHVYKSQRPRYEE 136
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
W P + IL IQ LL +PN PA +EA ++ +N+ EY++
Sbjct: 120 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNR 163
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
W P + IL IQ LL +PN PA +EA ++ +N+ EY++
Sbjct: 71 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNR 114
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
W P + IL IQ LL +PN PA +EA ++ +N+ EY++
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNR 139
>04_04_1516 -
34122205-34122348,34122430-34122534,34122878-34123005,
34124003-34124072
Length = 148
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 469
W PA+TI ++LL I LL +PN DP E +Y +R +Y+
Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 469
W PA+T+ ++LL I LL +PN DP E +Y +R +Y+
Sbjct: 93 WSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 469
W PA+TI ++LL I LL +PN DP E +Y +R +Y+
Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYE 135
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 469
W PA+TI ++LL I LL +PN DP E +Y +R +Y+
Sbjct: 317 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRHKYE 359
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 469
W PA+TI ++LL I LL +PN DP E + +RL Y+
Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDRLRYE 135
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNR 481
W PA+TI ++LL I LL +PN DP E +Y +R
Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 131
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 36.7 bits (81), Expect = 0.014
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 600 DWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
DW+P + + I+ G+ L ++PN +DP EA + N ++++
Sbjct: 422 DWKPVLNVNTIVYGLNLLFSQPNDEDPLNHEAAAVLRDNPEKFER 466
>10_02_0151 +
5895708-5895736,5896291-5896403,5897956-5898064,
5898580-5898658,5898747-5898863,5900001-5900138
Length = 194
Score = 35.5 bits (78), Expect = 0.033
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 600 DWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQN 484
DW+P + I ++ G+ L +PN +DP EA + N
Sbjct: 130 DWKPVLNINTVIYGLNLLFTQPNDEDPLNHEAAAVLRDN 168
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
W P T++ I+L I +L+ PN + PA EA + + R ++ K
Sbjct: 113 WTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKRDDFKK 156
>01_01_1187 + 9444742-9445317
Length = 191
Score = 33.9 bits (74), Expect = 0.100
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 466
W A ++ ILL IQ LL EPN P +A ++ N+ E+ K
Sbjct: 139 WSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALW-PNQDEFRK 181
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 469
W+P++ I +L I LL++PN D AE Y NR +D
Sbjct: 107 WQPSLNIATVLTSIGLLLSDPNPDDGLMAEISREYKYNRQVFD 149
>01_07_0028 -
40588611-40588718,40588812-40588901,40589966-40590125,
40590547-40590595,40591158-40591338
Length = 195
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 597 WRPAITIKQILLGIQDLLNEPNVKDPAQA 511
W PA+T+K LL +Q LL+ P DP A
Sbjct: 97 WSPALTLKTALLSLQALLSAPAPDDPQDA 125
>09_02_0429 +
9306862-9306970,9307834-9307942,9308538-9308616,
9308806-9308922,9309185-9309314,9311071-9311111
Length = 194
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 600 DWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTI 496
DW+P + I I+ G+ L +PN +DP +A +
Sbjct: 119 DWKPVLNINTIVYGLNLLFIQPNDEDPLNHDAAAV 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,641,683
Number of Sequences: 37544
Number of extensions: 210910
Number of successful extensions: 353
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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