Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_D02
         (757 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1028 - 23752118-23752274,23753918-23754053,23754236-237551...    30   1.7  
04_04_0244 - 23869222-23870322,23871456-23871521                       30   1.7  
02_04_0456 - 23089507-23090607,23091561-23091635                       30   1.7  
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669...    30   2.3  
03_06_0453 - 34031862-34032668                                         30   2.3  
06_03_0242 - 18610770-18611201                                         29   5.3  
12_02_0042 + 12738990-12739421                                         28   7.0  
09_02_0137 - 4759112-4759735                                           28   7.0  
07_03_0720 - 20926363-20926794                                         28   7.0  
07_01_1059 + 9314521-9315144                                           28   7.0  
06_02_0310 + 14158693-14159316                                         28   7.0  
05_01_0408 - 3223472-3223903                                           28   7.0  
04_01_0517 + 6784158-6784589                                           28   7.0  
01_01_0798 + 6208138-6208140,6208798-6208897,6209228-6209688           28   7.0  
02_04_0458 - 23102262-23102377,23102505-23102661,23103094-231041...    28   9.2  

>08_02_1028 -
           23752118-23752274,23753918-23754053,23754236-23755195,
           23755770-23756373
          Length = 618

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 442 IIFSICSMSPRHKHFVCCSXVFSRCQRIKMYCS 540
           ++FS  ++SPR +H+ C   + SR  +++  CS
Sbjct: 354 LMFSKYAISPRAEHYACIVDILSRAGQLEKACS 386


>04_04_0244 - 23869222-23870322,23871456-23871521
          Length = 388

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 171 CFRHGRDHALHFSQLISHMNRLRFPYY---QMVHSMYCKVHELF 293
           CFR+  D A    Q  SH++R+RF Y+   + +  + C+  +LF
Sbjct: 294 CFRYISDFAFKM-QAYSHVDRIRFKYFLNPERIQDVICRGADLF 336


>02_04_0456 - 23089507-23090607,23091561-23091635
          Length = 391

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +3

Query: 171 CFRHGRDHALHFSQLISHMNRLRFPYY---QMVHSMYCKVHELF 293
           CFRH  D      Q  SH++R+RF Y+   + +  + C+  +LF
Sbjct: 297 CFRHINDFVFKM-QAYSHVDRIRFKYFLNPKRIQHVICQGADLF 339


>04_03_0849 +
           20265511-20265984,20266452-20266617,20266694-20266905,
           20267154-20267647,20267732-20267780,20267922-20268251
          Length = 574

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
 Frame = -2

Query: 567 YENEPLYIARAIHFNSLTPGKYXRTTNKMFVPWGHTAYRKYDFEILCGF------NYEWV 406
           Y   P+    A   N  +P  Y +   + FVP G     K D+EI+  F         W 
Sbjct: 102 YCGSPVGTIAACDPNDASPLNYDQVFIRDFVPSGIAFLLKGDYEIVRNFILHTLQLQSWE 161

Query: 405 KTSDNYIPENAVVGGYSEVRYEPL 334
           KT D + P   ++    +VR  PL
Sbjct: 162 KTMDCHSPGQGLMPASFKVRVVPL 185


>03_06_0453 - 34031862-34032668
          Length = 268

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 732 PTIIDEAEVRWVIERPPIFLNSLHCKSDKEIEGGELRWVK 613
           P +  +  VR  ++ PP+ L+SL       I GGELRWV+
Sbjct: 71  PVLTVQESVRATLDSPPL-LSSLLPHRANLIGGGELRWVQ 109


>06_03_0242 - 18610770-18611201
          Length = 143

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 32  QELSCMCVHEVREAPEMVLMHGIGLVLTG 60


>12_02_0042 + 12738990-12739421
          Length = 143

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 32  QELSCMCVHEVREAPEMLLMHGIGLVLTG 60


>09_02_0137 - 4759112-4759735
          Length = 207

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 32  QELSCMCVHEVREAPGMLLMHGIGLVLTG 60


>07_03_0720 - 20926363-20926794
          Length = 143

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 32  QELSCMCVHEVREAPGMLLMHGIGLVLTG 60


>07_01_1059 + 9314521-9315144
          Length = 207

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 32  QELSCMCVHEVREAPGMLLMHGIGLVLTG 60


>06_02_0310 + 14158693-14159316
          Length = 207

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 32  QELSCMCVHEVREAPGMLLMHGIGLVLTG 60


>05_01_0408 - 3223472-3223903
          Length = 143

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 32  QELSCMCVHEVREAPEMLLMHGIGLVLTG 60


>04_01_0517 + 6784158-6784589
          Length = 143

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 32  QELSCMCVHEVREAPEMLLMHGIGLVLTG 60


>01_01_0798 + 6208138-6208140,6208798-6208897,6209228-6209688
          Length = 187

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 494 QQTKCLCLGDILHIENMILRYYVGLIMSG 408
           Q+  C+C+ ++     M+L + +GL+++G
Sbjct: 76  QELSCMCVHEVREAPEMLLMHGIGLVLTG 104


>02_04_0458 -
           23102262-23102377,23102505-23102661,23103094-23104140,
           23104357-23104500,23105389-23105457
          Length = 510

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +3

Query: 171 CFRHGRDHALHFSQLISHMNRLRFPYY---QMVHSMYCKVHELF 293
           CFR+  D      Q  SH++R+RF Y+   + +  + C+  +LF
Sbjct: 343 CFRYISDFVFKM-QAYSHVDRIRFKYFLNPKRIQHVICRGADLF 385


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,980,608
Number of Sequences: 37544
Number of extensions: 379547
Number of successful extensions: 851
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)