Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_D01
(368 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 200 2e-52
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 200 2e-52
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 150 3e-37
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 149 6e-37
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 149 6e-37
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 94 3e-20
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 81 2e-16
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 74 3e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 64 4e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 64 4e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 54 2e-08
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 46 6e-06
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 43 6e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 41 2e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 40 6e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 40 6e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 36 0.007
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 36 0.007
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 34 0.037
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 32 0.11
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 32 0.11
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 30 0.45
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 1.8
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 28 1.8
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 27 3.2
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 27 5.5
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 26 7.3
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 26 7.3
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 26 7.3
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 26 7.3
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 26 7.3
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z81124-9|CAB03379.2| 328|Caenorhabditis elegans Hypothetical pr... 26 9.7
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 26 9.7
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 200 bits (489), Expect = 2e-52
Identities = 97/108 (89%), Positives = 99/108 (91%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 144 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPXAT 1
IQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL P A+
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRAS 108
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 200 bits (489), Expect = 2e-52
Identities = 97/108 (89%), Positives = 99/108 (91%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 144 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPXAT 1
IQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL P A+
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRAS 108
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 150 bits (364), Expect = 3e-37
Identities = 74/78 (94%), Positives = 74/78 (94%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 144 IQKESTLHLVLRLRGGTI 91
IQKESTLHLVLRLRGG I
Sbjct: 821 IQKESTLHLVLRLRGGDI 838
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 146 bits (355), Expect = 3e-36
Identities = 72/76 (94%), Positives = 72/76 (94%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTL GKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 146 bits (355), Expect = 3e-36
Identities = 72/76 (94%), Positives = 72/76 (94%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTL GKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 93.1 bits (221), Expect = 6e-20
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAG 184
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 149 bits (361), Expect = 6e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 144 IQKESTLHLVLRLRGG 97
IQKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 149 bits (361), Expect = 6e-37
Identities = 73/78 (93%), Positives = 74/78 (94%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQR IFAG QLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 144 IQKESTLHLVLRLRGGTI 91
IQK+STLHLVLRLRGG I
Sbjct: 821 IQKQSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 93.9 bits (223), Expect = 3e-20
Identities = 43/76 (56%), Positives = 55/76 (72%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
M I VKTLTGK I L++E +D + +K K+++KEGIPP QQR IFAG Q+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 144 IQKESTLHLVLRLRGG 97
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 81.0 bits (191), Expect = 2e-16
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYN 145
+ + VKTL GKTI + ++ +DT+ +K K+Q+K G+PPDQQR IF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 144 IQKESTLHLVLRLR 103
I+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = -3
Query: 303 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQKESTL 124
+TG IT VEASD I ++ K+ + + P + +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 123 HL 118
L
Sbjct: 152 RL 153
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -3
Query: 333 SNTMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGI 217
S TM + VKT TGKTIT+E NVK +++DK+G+
Sbjct: 56 SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.1 bits (174), Expect = 3e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIP 214
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 63.7 bits (148), Expect = 4e-11
Identities = 34/74 (45%), Positives = 50/74 (67%)
Frame = -3
Query: 318 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQ 139
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QR +AG QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 138 KESTLHLVLRLRGG 97
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 63.7 bits (148), Expect = 4e-11
Identities = 34/74 (45%), Positives = 50/74 (67%)
Frame = -3
Query: 318 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQ 139
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QR +AG QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 138 KESTLHLVLRLRGG 97
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 54.4 bits (125), Expect = 2e-08
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = -3
Query: 321 QIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNI 142
QIFVK L G + ++ DT+ ++K I+ + IP F+G +LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 141 QKESTLHLVLR 109
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 46.4 bits (105), Expect = 6e-06
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLE---DGRTLS 154
++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+ + L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 153 DYNIQKESTLHL 118
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 30.7 bits (66), Expect = 0.34
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQ-LEDGRTLSDY 148
M + +KT TGK IT+E S VK +++DK+G+ G Q +E T+ D
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 147 NIQK 136
IQ+
Sbjct: 56 KIQE 59
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEV 274
+ +FVKT TGKTIT+ +
Sbjct: 181 IDVFVKTYTGKTITISI 197
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 43.2 bits (97), Expect = 6e-05
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = -3
Query: 318 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFA 187
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QR +A
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYA 44
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 41.1 bits (92), Expect = 2e-04
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = -3
Query: 366 NELLSKHVFHRSNT---------MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIP 214
NE+L K NT Q FV+ L GKT TL V ASDT+ K ++
Sbjct: 20 NEMLRKRCLQVKNTKMKNSSMPKFQYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN---- 74
Query: 213 PDQQRXIFAGXQLEDGRTLSDYNIQKESTLHLVLRL 106
R + G L D T +YNI ST+ L R+
Sbjct: 75 ARSTRMSYGGKPLSDQITFGEYNISNNSTMDLHFRI 110
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 39.9 bits (89), Expect = 6e-04
Identities = 16/69 (23%), Positives = 39/69 (56%)
Frame = -3
Query: 303 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQKESTL 124
+ G + ++ + + +K +IQD+ G+P +Q+ + G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 123 HLVLRLRGG 97
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 39.9 bits (89), Expect = 6e-04
Identities = 16/69 (23%), Positives = 39/69 (56%)
Frame = -3
Query: 303 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQKESTL 124
+ G + ++ + + +K +IQD+ G+P +Q+ + G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 123 HLVLRLRGG 97
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 39.5 bits (88), Expect = 7e-04
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = -3
Query: 300 TGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQKESTLH 121
+G L V SDTI VK I + R + LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 120 L 118
L
Sbjct: 241 L 241
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -3
Query: 282 LEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQKESTL 124
L V SDTI +K +I GI R LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 36.3 bits (80), Expect = 0.007
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 282 LEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQKESTLHLVLRLR 103
L V SDTI ++K +I + R + G LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 33.9 bits (74), Expect = 0.037
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = -3
Query: 360 LLSKHVFHRSNTMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEG--IPPDQQRXIFA 187
L + ++ + + +TLT LE+ TI VKA + ++G P+ Q+ I+
Sbjct: 40 LFCSFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYN 99
Query: 186 GXQLEDGRTLSDYNIQKESTLHLVLRLRGGT-IEPS 82
G L+D + + + ++L R T + PS
Sbjct: 100 GKILDDSVKVGEVGFDSSKFVVVMLSKRKVTEVAPS 135
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 32.3 bits (70), Expect = 0.11
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = -3
Query: 327 TMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDY 148
T+++ +KTL + T+ + DTI ++ + + I QR I G L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 147 NIQKESTLHLVLR 109
I T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 32.3 bits (70), Expect = 0.11
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = -3
Query: 327 TMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDY 148
T+++ +KTL + T+ + DTI ++ + + I QR I G L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 147 NIQKESTLHLVLR 109
I T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 30.3 bits (65), Expect = 0.45
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 324 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQ-LEDGRTLSDY 148
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 147 NIQK 136
IQ+
Sbjct: 56 KIQE 59
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/65 (20%), Positives = 30/65 (46%)
Frame = -3
Query: 309 KTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQKES 130
KT + +TL + + I ++ ++ IP D+ +F G +L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 129 TLHLV 115
+ L+
Sbjct: 73 QIMLL 77
>Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical
protein Y57G11C.9c protein.
Length = 77
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 307 NPYGEDHYIGGGSFRHYRXCQS*NPRQGRYSSRP 206
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 307 NPYGEDHYIGGGSFRHYRXCQS*NPRQGRYSSRP 206
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 307 NPYGEDHYIGGGSFRHYRXCQS*NPRQGRYSSRP 206
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/66 (22%), Positives = 36/66 (54%)
Frame = -3
Query: 306 TLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRXIFAGXQLEDGRTLSDYNIQKEST 127
++ G+ ++ +++ +K KI+ + GIP + G L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 126 LHLVLR 109
+ L++R
Sbjct: 207 VELLVR 212
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 319 NIRQNPYGEDHYIGGGSFRHYRXCQS*NPRQGRYSSRPTTXHLCRXTI--RRWPHSFR 152
NI+ N ++H I G R ++ +P GR+S+ +T R T+ R+ HSF+
Sbjct: 31 NIKAN---QEHIIYGEKCRLVGFLETESPSTGRFSTNHSTWTHSRPTVSGERFTHSFK 85
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 26.6 bits (56), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 54 CEKMICRKCYARLHPXAT 1
C++ CRKC A HP T
Sbjct: 928 CDRSYCRKCLAEPHPDDT 945
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 328 HNANIRQNPYGEDHYIGGGS 269
H++N P G DH++ GGS
Sbjct: 49 HHSNTWSRPSGSDHHVYGGS 68
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 26.2 bits (55), Expect = 7.3
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 225 EGIPPDQQRXIFA-GXQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 73
EG P R + + G QL DG L +I+K + RGG E L I
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1514
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 26.2 bits (55), Expect = 7.3
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 225 EGIPPDQQRXIFA-GXQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 73
EG P R + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 26.2 bits (55), Expect = 7.3
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 225 EGIPPDQQRXIFA-GXQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 73
EG P R + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans homeobox
protein 44,isoform a protein.
Length = 1273
Score = 26.2 bits (55), Expect = 7.3
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 229 VLDFSFDIXDSVGSFHLQCNGL-PRKGFDEYLHCVAPM 339
+LD +F+I V L+ NG+ PR DEYLHC + M
Sbjct: 986 ILD-TFEIVYQVKGI-LEENGISPRVFGDEYLHCTSSM 1021
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -3
Query: 366 NELLSKHVFHRSNTMQIFVKTLT---GKTITLEVEASDTIXNVKAKIQDKEGIP 214
+ L+ +H S + FV+T++ G+TI V + I + K+ EG+P
Sbjct: 258 DNLIIQHNIDLSEALCGFVRTISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>Z81124-9|CAB03379.2| 328|Caenorhabditis elegans Hypothetical
protein T21B4.12 protein.
Length = 328
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 227 LSWILALTXSIVSEASTSNVMVFPVRVLTNICIVLLL*KTCLESNSF 367
L W+ T I T V++ + LT C VLL K + S +F
Sbjct: 168 LGWVGEFTPCIDIMQKTFLVVMMTICALTTCCSVLLFIKLIIHSPNF 214
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3
Query: 192 FAGXQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 91
+ G +L+D R++ YNI + ++L + + T+
Sbjct: 131 YGGQKLQDNRSIGSYNIDQSREIYLKKKKKLSTL 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,915,119
Number of Sequences: 27780
Number of extensions: 170432
Number of successful extensions: 443
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -