Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_C21
         (456 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical pr...    30   0.92 
Z81102-3|CAB03201.2|  189|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z74030-13|CAA98445.2|  336|Caenorhabditis elegans Hypothetical p...    27   8.6  

>U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical
           protein ZC204.10 protein.
          Length = 238

 Score = 29.9 bits (64), Expect = 0.92
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = -1

Query: 243 LKNLATLSLHILNFLPILSCLLNQILLMLFLVSR*INMFENSILIGT 103
           ++N+ +L LH++N   ILS   + ILL  FL ++ +N+     + G+
Sbjct: 185 IQNVRSLELHVVNLDYILSSNSSDILLYCFLSNKDLNLLMKQWIKGS 231


>Z81102-3|CAB03201.2|  189|Caenorhabditis elegans Hypothetical
           protein M02B1.2 protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -1

Query: 219 LHILNFLPILS-CLLNQILLMLFLVSR*INMF 127
           L +L+ L ++S C LN ILL +F++ +   MF
Sbjct: 66  LFVLSLLGLISLCFLNSILLFVFILGQTAMMF 97


>Z74030-13|CAA98445.2|  336|Caenorhabditis elegans Hypothetical
           protein D1054.12 protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 434 TMSLPRPAW*YLVVLWYLYHTI 369
           ++ +P+  +  L + WYLYHT+
Sbjct: 205 SLIIPQALYFVLSIFWYLYHTV 226


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,443,530
Number of Sequences: 27780
Number of extensions: 176363
Number of successful extensions: 358
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)