Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_C19
         (490 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0118 - 12492206-12492415,12492746-12492816,12493611-124936...    33   0.093
04_04_0778 + 28019924-28020553,28020657-28020797,28021359-28021454     28   4.6  
12_01_0060 - 499291-501228                                             27   6.1  
11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-45...    27   6.1  
02_05_0234 + 27062945-27063281,27064273-27064568,27064928-270650...    27   8.1  

>09_03_0118 -
           12492206-12492415,12492746-12492816,12493611-12493634,
           12494061-12494114,12494803-12496345
          Length = 633

 Score = 33.5 bits (73), Expect = 0.093
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = -2

Query: 441 IDEMGSRVDELEKNITDLMTQAGVE 367
           +DEMG+++DELE+++ DL  + G +
Sbjct: 594 LDEMGTKIDELEQSVNDLKAEMGTD 618


>04_04_0778 + 28019924-28020553,28020657-28020797,28021359-28021454
          Length = 288

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 199 ITISPNKTTSSKEFEIGISN*IISFESFQLFSLVYCIYKLKSAIFNNLVTF 47
           +T+     ++SK   +GI     SF    +F+LVYC   +  A  N  VTF
Sbjct: 72  LTVMGVNNSTSKCATVGIQGIAWSFGGM-IFALVYCTAGISGAHINPAVTF 121


>12_01_0060 - 499291-501228
          Length = 645

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 480 DKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGVENEK 358
           DK   +SDQI  ++DE+G  +  +    T  +    VE+E+
Sbjct: 529 DKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEE 569


>11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-452293
          Length = 1430

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 480  DKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGVENEK 358
            DK   +SDQI  ++DE+G  +  +    T  +    VE+E+
Sbjct: 1314 DKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEE 1354


>02_05_0234 +
           27062945-27063281,27064273-27064568,27064928-27065068,
           27065556-27065644,27067444-27067516
          Length = 311

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 199 ITISPNKTTSSKEFEIGISN*IISFESFQLFSLVYCIYKLKSAIFNNLVTF 47
           +T+     +SSK   +GI     SF    +F+LVYC   +     N  VTF
Sbjct: 73  LTVMGVSKSSSKCATVGIQGIAWSFGGM-IFALVYCTAGISGGHINPAVTF 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,259,987
Number of Sequences: 37544
Number of extensions: 169553
Number of successful extensions: 405
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)