Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_C16
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82060-7|CAB04884.1|  454|Caenorhabditis elegans Hypothetical pr...   106   1e-23
Z82060-9|CAJ85764.1|  166|Caenorhabditis elegans Hypothetical pr...    47   2e-05
Z82060-8|CAJ85763.1|  114|Caenorhabditis elegans Hypothetical pr...    32   0.47 
U23147-7|AAC46691.1|  596|Caenorhabditis elegans Rapsyn protein ...    31   0.62 
U09415-1|AAA82164.1|  655|Caenorhabditis elegans Ceprp21 protein.      30   1.4  
AF106576-5|AAC78179.1|  655|Caenorhabditis elegans Yeast prp (sp...    30   1.4  
U64836-8|AAG24063.1|  339|Caenorhabditis elegans Serpentine rece...    29   2.5  
U80438-1|AAB37631.1|  400|Caenorhabditis elegans Hypothetical pr...    28   7.6  
L08403-7|AAA28019.2|  309|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AF045645-3|AAC02610.2|  193|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z82060-7|CAB04884.1|  454|Caenorhabditis elegans Hypothetical
           protein T27F6.5a protein.
          Length = 454

 Score =  106 bits (255), Expect = 1e-23
 Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
 Frame = -1

Query: 680 VHKVEAPSGDMGGSFSHEWQLAATSGEDQIKVCPSCSHAALLDHEG-ARCQSCR----KD 516
           V KVEA SG  GG  SHE+ L ++  ED +  C +C +    +  G A+C+ C     K 
Sbjct: 196 VIKVEADSGVHGGHISHEYHLKSSLEEDFVNFCENCKNHNKFEGPGPAKCEKCAENSSKT 255

Query: 515 AEILQSIEVGHTFILGTKYSEALEATYCPPSGPPLPIIMSCYGIGITR-XXXXXXXXXXX 339
            + + S+E+ HTF LGTKYSEAL A +    G PL   M C+GIG+TR            
Sbjct: 256 VQKIPSVEIAHTFHLGTKYSEALGAKF---QGKPLD--MCCFGIGVTRLLPAAIDLLSVS 310

Query: 338 XXXLRWPKAIAPYSAIIIGPKEGSKEWNDHGMDQVKLVYDALNSVPALRSDVLVDDRHGL 159
              LR P+AIAP+ A+II  K          M  V +   + ++   L+  +L+DDR  +
Sbjct: 311 DKALRLPRAIAPFDAVIIVKKS--------LMSNVIVEMASSSASRYLKGGILLDDRVEM 362

Query: 158 TIGKRLLMADKMGYPIVIACGKE 90
           + GKR+  A+++G P ++    E
Sbjct: 363 SAGKRIHDANRLGIPFILVIANE 385


>Z82060-9|CAJ85764.1|  166|Caenorhabditis elegans Hypothetical
           protein T27F6.5c protein.
          Length = 166

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
 Frame = -1

Query: 401 MSCYGIGITRXXXXXXXXXXXXXXL-RWPKAIAPYSAIIIGPKEGSKEWNDHGMDQVKLV 225
           M C+GIG+TR                R P+AIAP+ A+II  K          M  V + 
Sbjct: 1   MCCFGIGVTRLLPAAIDLLSVSDKALRLPRAIAPFDAVIIVKKSL--------MSNVIVE 52

Query: 224 YDALNSVPALRSDVLVDDRHGLTIGKRLLMADKMGYPIVIACGKE 90
             + ++   L+  +L+DDR  ++ GKR+  A+++G P ++    E
Sbjct: 53  MASSSASRYLKGGILLDDRVEMSAGKRIHDANRLGIPFILVIANE 97


>Z82060-8|CAJ85763.1|  114|Caenorhabditis elegans Hypothetical
           protein T27F6.5b protein.
          Length = 114

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -1

Query: 197 LRSDVLVDDRHGLTIGKRLLMADKMGYPIVIACGKE 90
           L+  +L+DDR  ++ GKR+  A+++G P ++    E
Sbjct: 10  LKGGILLDDRVEMSAGKRIHDANRLGIPFILVIANE 45


>U23147-7|AAC46691.1|  596|Caenorhabditis elegans Rapsyn protein 1
           protein.
          Length = 596

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = -1

Query: 575 CSHAALLDHEGARCQSCRKDAEILQSIEVGHTFILGTKYSEALEATYCPPSGPPLPIIMS 396
           C H  LL      C  CR  A +  +I +  + I  T   ++   ++ PP G   P++ +
Sbjct: 401 CLHTYLLQRTDQTCPKCRCRAVLSDNISI-RSSIASTIDVQSPSTSFAPPGGVATPLVSA 459

Query: 395 CYGIG 381
              +G
Sbjct: 460 AAELG 464


>U09415-1|AAA82164.1|  655|Caenorhabditis elegans Ceprp21 protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 254 DHGMDQVKLVYDALNSVPALRSDVLVDDRHGLTIGKRLLMAD 129
           +HGMD   + +    + P       + DR+G+ +GK+ LM+D
Sbjct: 581 EHGMDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSD 622


>AF106576-5|AAC78179.1|  655|Caenorhabditis elegans Yeast prp
           (splicing factor) relatedprotein 21 protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 254 DHGMDQVKLVYDALNSVPALRSDVLVDDRHGLTIGKRLLMAD 129
           +HGMD   + +    + P       + DR+G+ +GK+ LM+D
Sbjct: 581 EHGMDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSD 622


>U64836-8|AAG24063.1|  339|Caenorhabditis elegans Serpentine
           receptor, class h protein187 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +2

Query: 581 DTLLSGLRQRSPRAATRVRSFLPYRPTELRLCAL 682
           DTLL  +++RS R+ + V++    + TE+++C L
Sbjct: 306 DTLLGLMKRRSSRSQSTVQNIFSMKVTEMKVCYL 339


>U80438-1|AAB37631.1|  400|Caenorhabditis elegans Hypothetical
           protein T19B4.5 protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 129 ISHEQSLSDGEAVAVVDQHIGPQSR 203
           ++HE+ + DG    VVD H  PQ R
Sbjct: 27  VAHEEIVDDGSTEMVVDHHHHPQLR 51


>L08403-7|AAA28019.2|  309|Caenorhabditis elegans Hypothetical
           protein F42H10.9 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -1

Query: 710 EHXFRALHLKVHKVEAPSGDMGGSFSHEWQLAATSGEDQIK 588
           E   R LH+K  +     GD+       W L A   E Q+K
Sbjct: 116 EEHHRRLHVKAERASVIGGDIVDGAFGSWALRAARSEHQLK 156


>AF045645-3|AAC02610.2|  193|Caenorhabditis elegans Hypothetical
           protein K02D7.2 protein.
          Length = 193

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 692 LHLKVHKVEAPSGDMGGSFSHEWQL 618
           +HLK H +     D G SFS  W L
Sbjct: 87  MHLKTHSLPCVCNDCGKSFSRPWLL 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,330,712
Number of Sequences: 27780
Number of extensions: 395140
Number of successful extensions: 1284
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)